Choristoneura fumiferana (eastern spruce budworm): 141432008
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Entry
141432008 CDS
T11020
Symbol
Syx5
Name
(RefSeq) syntaxin 5 isoform X1
KO
K08490
syntaxin 5
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
141432008 (Syx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfum04131
]
141432008 (Syx5)
Membrane trafficking [BR:
cfum04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
141432008 (Syx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
ATG17_like
Bacillus_HBL
MCPsignal
DUF4731
FliJ
UPF0242
DUF16
Motif
Other DBs
NCBI-GeneID:
141432008
NCBI-ProteinID:
XP_073949465
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All DBs
Position
10:complement(8120756..8122648)
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AA seq
367 aa
AA seq
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MLPRRRNIGVSVTTSDETPLLENELNSYSKFDKKGSKYYQPERQGSAIPIISTKQGVAFE
ESDIVFDFLKEPVFEVVMAARDRTNEFASTVRSLQGRTLARPIVRDERKATVLQTYSQFM
SMAKVISKNITGTYAKLEKLALLAKKKSLFDDRPTEIQELTYIIKGDLSSLNQQIARLGE
MPRGRRSMHSHSSSVVLALQSRLASMSNQFKQVLEVRSENLKHQNNRREQFSRVGPVVKE
IPSILQQQDEVSIDLGETMGFQTQTQQLALRDDTDTYVQQRAETMHNIESTIVELGGIFQ
QLAHMVKEQDEAIGRIDTNIQEAEMNVEAGHREIMKYFQSVTGNRALMFKVFGVLIFFFI
FFVVVMA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctcggcgtcggaatataggtgtgtcagtgactacctccgatgagacaccacta
ctggaaaatgaattaaattcttacagtaaatttgacaagaaaggatcaaaatattatcaa
ccagagaggcaaggatcggccattcccataatttctacaaaacaaggagtggctttcgaa
gaatctgatatagtgtttgattttcttaaggagcctgtatttgaagtggtcatggctgca
agggataggactaatgagttcgcgtccacagtacgcagccttcaaggccgcacattggcc
aggcccatcgtgcgagacgaacgcaaagctacagtgcttcagacctattctcagttcatg
tcaatggctaaagttattagtaaaaacattacaggaacttatgccaagctggagaaactc
gctttattggcaaaaaagaaatctctatttgacgatcgtcctactgaaatacaagagctg
acatatataatcaagggtgacttaagttcactcaaccaacaaatagctcggctgggtgag
atgcctcgcggccgccgcagcatgcacagccactcttctagcgtggttctggctctgcag
tcaagactagcatctatgagcaaccagtttaaacaggttcttgaagtgagatcagaaaac
ttgaaacatcagaataatagaagagaacaattttcaagggtaggccctgttgtaaaagaa
attccttctattctacaacagcaagatgaagttagtatagacttgggtgaaactatgggc
ttccagactcaaacccagcagctagctctaagagatgacactgacacttatgtgcagcag
agagccgagacaatgcataacattgagagcactattgtggaattgggagggatttttcaa
cagttagctcacatggtcaaggaacaagatgaagctattggtaggattgatactaatatc
caagaagctgagatgaatgttgaagcaggtcacagagaaataatgaaatatttccagagt
gttacaggcaaccgagcacttatgttcaaagtttttggggttctcatattcttttttata
ttctttgtcgttgtaatggcttga
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integrated database retrieval system
