Choristoneura fumiferana (eastern spruce budworm): 141432078
Help
Entry
141432078 CDS
T11020
Symbol
rdgB
Name
(RefSeq) retinal degeneration B
KO
K24069
membrane-associated phosphatidylinositol transfer protein
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfum04131
]
141432078 (rdgB)
Membrane trafficking [BR:
cfum04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
141432078 (rdgB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IP_trans
LNS2_PITM1-3
PITM1-3
DDHD
Transthyretin
Motif
Other DBs
NCBI-GeneID:
141432078
NCBI-ProteinID:
XP_073949564
LinkDB
All DBs
Position
10:10588751..10596847
Genome browser
AA seq
1170 aa
AA seq
DB search
MLIKEYRIPLPLTVEEYRIAQLYMIAKKSREESSGEGSGVEILVNEPYEDGPGGKGQYTQ
KIYHVGSHLPGWFKSLLPKSALTVSEEAWNAYPYTKTRYTCPFVEKFSLEIETYYFGDNG
HQENVFKLSGSDLKNRVVDMIDVVKDQLYGADYIREEDPTLFVSQKCNRGPLSETWLDDY
WKEVQGKPQPLPNGKSLMCAYKLCKVEFRYWGMQTKLEKFIHDVALRKTMLRAHRQAWAW
QDEWFGLTMEDIREIERQTQLALQKKMAGDTSDDQDISEDNSKSLAATMSSLEKNEDVPT
PIVTKKNNMEKRMQKHLSPEGTPPSEHKSSKSNLRSSSSGSIKSLQAQAANWRMETLVRE
SETETGSEDEFYDAESSFNKWSSMCSLDEGDIDISPTQADQNQEDSIFNPSFLKRVTSER
GSRRIGTLQSHQSIDGCPDTPVHGSCQTTVLILVFHGGSVLDANIDMTAKKSDVTTFKGA
FESVMRQHYPTLVGHIVIKLVPCPSVCTESLGILSTLSPYSFDCSPSTVETPSLTNDLIP
IGAIPLIATASPDYAESVTKTINSANAVYNEFIKSSDGKGFSGQVCIVGDSVGSILAYDS
LCRTLQYQSRHDSENSILDTEITIPNDPTENFINKSHLQAPTPRRRSSSTSDNQVKLEFE
VSDFFTFGSPLSVIVASRKISDDKSRDIAKPPVQQVFNLFHPTDPVAARLEPLLSARFTN
LPPINIARYAKYPLGNGQPYHLMELIQSHPQLFGDHLQMPPTPVLRRLSEVSMQSTVSGL
VDNIPLITMNALQQKWWGSKRLDYALYCPEGLTNFPMNALPHLFHASYWESSDVIAFILR
QVGHFDLALYGHSDDKDSQSFNPGQEREKWIKKRTSVKLKNVAANHRANDVIVKEGCLQS
FSARFMYGPLDMITLTGEKVDIHMMKDPPAGEWTLLSTVVTDKTGRISYSLTEKQSVGCG
IYPMRLVVRGDHTSCSFHLAVVPPETECVVFSIDGSFTASVSVTGRDPKVRAGAVDVVRF
WQDLGYLILYITGRPDMQQRKVVSWLAEHNFPHGLVFFSDGFSTDPLGHKAAHLKSLINE
HGVILHSAYGSGKDISVYNNCGLSAKQIYAIGRISKKYNHMATTLSDGYASHLADLKSPG
VVRPARGNARLLVPRRLLAPVSSVSSRGRR
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgttgataaaagagtatagaattcctttacctcttacggtagaagagtatagaattgcg
cagctgtatatgattgcaaagaaaagcagagaagaaagttcgggtgaaggtagtggtgtt
gaaattctggtcaatgagccatatgaagatggtcctggaggtaaaggtcagtacacacaa
aaaatataccatgttggtagtcatttaccaggatggttcaaaagtctactgccaaagtca
gctttaacagtatctgaagaagcctggaatgcttatccatacactaaaacaaggtacaca
tgtccatttgttgaaaaattctcattagaaatagaaacttattacttcggtgataatggc
caccaagaaaatgtcttcaaattatctggcagtgacttaaaaaatagggtagttgatatg
attgatgttgtgaaagaccaactttatggtgccgattacataagagaagaagacccaaca
ctttttgtctctcaaaaatgtaatagaggtcctttgtctgaaacttggttagatgattat
tggaaagaagttcaaggaaaaccccaaccattgccaaatggaaaatctctaatgtgtgcc
tacaaactatgtaaggtggaattccgatattggggtatgcaaacgaaattagagaaattt
attcacgatgtcgccttacggaaaaccatgttacgcgctcatcgccaagcgtgggcttgg
caagatgaatggtttggtttaaccatggaagacatacgagaaattgaaagacaaactcag
cttgcactgcagaaaaagatggcaggagatacgagtgatgatcaagatatttcagaggat
aactctaaatccctggccgctacaatgagcagtctcgaaaagaacgaagatgtgccaact
ccaatagtgacgaagaagaataatatggaaaagaggatgcaaaagcatttgagccctgaa
ggaactcctccatccgaacacaaaagctcaaaatcgaatcttagatcatcgtcttctgga
tctatcaagagtttgcaagcgcaagcagctaactggcgtatggaaactcttgttagagaa
tctgaaactgaaactggatctgaagacgagttttatgacgctgagtcgtcgtttaacaaa
tggtcgtcaatgtgctccctcgatgaaggagacattgatatttctccgacacaagcagat
caaaatcaggaagacagtatttttaatccatcttttctaaaacgagttacttcagaaaga
ggttcccgcaggatcggaacattgcaaagccatcagagcatcgatggttgtccggacaca
ccagtccatggttcatgccaaactactgttttaatattagtattccacgggggtagcgtt
ttagatgctaatattgatatgacagctaaaaaatcagacgtaactacattcaaaggcgct
tttgagtcagtcatgcgccaacactatccgactcttgttggtcatatagtaataaagtta
gttccgtgcccatctgtttgcacagaaagccttggaatattatcaactttaagtccatat
agttttgattgctcaccatctacagtagaaactccatctctaactaatgatcttattcct
attggtgctattcctttaatagccacagcatctccagactatgccgaatctgttacaaaa
actatcaattctgctaacgctgtttataacgagttcattaagtcaagtgacggtaaagga
tttagtggtcaagtgtgcatagtaggtgacagcgtagggtctattctggcttatgactcc
ctatgtcgaactttacagtatcagtcgcgacatgatagcgaaaacagcattttagacact
gaaatcaccattcccaatgatccaactgaaaattttataaataaatctcatttacaagct
cctacgcccagaaggagatcatcttcaacaagtgataaccaagtaaaacttgaatttgaa
gtcagtgacttctttacatttggtagtccattgtcagtcattgtagcgtcacgaaaaatt
tctgatgataaatctcgtgatattgccaaaccacctgtacaacaggtatttaacttattc
catccaactgatccagtagctgctagactcgaacctctcctttcagctcgatttactaat
ttacctcctataaacattgctcgatatgcaaaatatcctttaggtaatggtcaaccgtac
catttaatggaactgattcaaagtcatccccagctgtttggagatcacttgcaaatgccc
ccaactccagtgctgaggcggctttccgaagtatccatgcaaagcaccgttagtggctta
gttgataacattcccctcattactatgaacgcactgcaacaaaaatggtggggctctaaa
agactagattacgccctgtattgcccagagggcttaacaaattttcctatgaatgcattg
ccacatttgttccatgcgagctattgggaaagttctgatgttatagcttttattctgcga
caggtcggtcattttgatttagcgttatatggccattctgatgataaagacagccaatca
tttaaccctggtcaagaaagagaaaagtggataaaaaagaggacttcagtaaaactaaaa
aatgtagctgcaaatcatagagctaacgacgtcatagtcaaggaagggtgcttacaaagt
ttctcagctagattcatgtatggtccgttggatatgattactttaactggggaaaaagta
gacatccacatgatgaaagaccctccagctggagaatggacgttattgtcaacagttgtg
actgataaaactggtaggatctcgtattcgctaactgaaaaacagagcgttggttgcggt
atataccctatgagacttgtagtaagaggtgaccatacgagttgcagtttccatctggct
gttgttcctcccgaaactgaatgcgtagtttttagcatcgatggttcttttactgcaagt
gtttctgttaccggtcgggacccgaaagtgagggccggtgcagttgatgtcgtgcgcttc
tggcaagatttaggatatctcattttgtacatcactggtagacccgacatgcaacaaaga
aaagttgtgtcatggcttgcagaacacaacttcccgcatggattggtattcttttcagac
ggattctcaacagacccgttagggcataaagcagcccatctgaaaagccttataaatgag
cacggcgttatcctgcattctgcttacgggtctggaaaagatattagcgtctataataac
tgtggattatccgctaagcaaatatatgctatcgggcgtattagtaaaaagtataatcat
atggcaacaactttaagtgatggatatgcctctcatttggcagatttaaagtcccctggt
gtcgtaaggcccgcaagaggcaacgctcggctccttgttccgagacgtttattggctcca
gtaagtagtgtatcatctcgtggccgtcgttaa
DBGET
integrated database retrieval system
