Choristoneura fumiferana (eastern spruce budworm): 141432131
Help
Entry
141432131 CDS
T11020
Name
(RefSeq) protein argonaute-3-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
Messenger RNA biogenesis [BR:
cfum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
141432131
Chromosome and associated proteins [BR:
cfum03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
141432131
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
141432131
microRNA pathway
RISC loading complex
141432131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
141432131
NCBI-ProteinID:
XP_073949679
LinkDB
All DBs
Position
10:12992534..13033945
Genome browser
AA seq
1152 aa
AA seq
DB search
MAKGKKKGGSKGKDEETTEVPSVSSLSISEAGPSTSQAEPEDEGLGLGMTSAAARRKAKK
AAKAAPIGTSIESTSQPEKSSEPPAEPTPVAAPKPEPKTEEKAEEDDGLGLGLGGGGKRR
PRKKKSQAAQEAAASQEAAAAPAVSAPPAAKPVAIAPAVQGAASGPAQPRATSTPIPWGG
AGRGRGRGEPAPPANYPGQQQGPGYPQQAGPPGIAYPQQPGPPMGYPQQPGPPMGYPQQP
GPPMGYPQQPGPPMGYPQQPGPPLGYPQQPGPPMGYPQQPAPPRGYPQQVVQQAAQPTPH
PAPQPAAPPAGQREGSASSSGSSATSRTVCRYKIPRRIDGNTVPCTAVRVVTNYLEMKIT
PLKIHRYDVSFKPDRPKKCIPQVFLLVKKKFFPKELIAFDQMKNCYAKNALPNVPMTDRF
TTEVELLDDNGKKMNFEVSFKFTGIVDLNTIVQYMKTGGTSLSPPTEAIQCVDVILRQGT
LESYIKAGRQFFKRPYSPIDLGFGLEMWTGLFQSAIFTTRPFINVDVAHKGFPKQQNLLQ
AFISDFSMNPHKPIEQQPKNEYLTSFLKGLKVVAYIGGDTSRTGQKREFIVNGLSEPADR
HTFRMDLPNGGHKMITVAEYFQKVKNVRLQYPRLNCVWVGPKDKNIYYPMELLEVAYGHA
RNKQLNDKQLSTMVKQAATPPDERKRKIEEVIKDMNYTGNKDFKQFGLEISDKFFAVQAK
VLPAPQLETGDPRVTTPRNGAWNAQKLLKAETLQRWGFIVIEPSSRFPPDYGGIIAMIKS
CGIQMGMTVTEPVVKHFNLQIKDLKNMLFKCLDEQVKFLFIVVSTRGKDYYHKVKQMAER
DVGILTQCIKEFTAEKRMNPQTVRNILLKVNSKLMGINQALDNRSMPACLKQGRVMVVGA
DVTHPSPEQSATPSIAAVTASIDPRCFIYNIALSIQTPKKEMIVEFEDMMVEHLTLYRQR
NGALPTKIFVFRDGVSEGQFAQVMNSELLAVHQAYQRLAGTAAKPEVLFLLVQKRHHTRL
FFENNPRNVEPGTVVDRDIVHATELDFYLVSHQAIKGTARPTRYHAVCNDGGLKHDEVEQ
LTYYLCHLYSRCMRSVSYPTPTYYAHLACLRARSLTYEEKFDNAGLEKAPKRLRVLDKCC
SIAVCSSCNSKT
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaggaaaaaagaaaggaggaagtaaagggaaggatgaagagacgactgaagtt
ccctctgtaagctccctgtctattagcgaggcagggccatcgacatcacaagccgagcca
gaagatgagggtttgggcttgggtatgacaagtgcggcagccaggaggaaggcaaagaag
gctgctaaagctgcgcctattggaacttctatagagagcacttcccagcctgaaaagtca
agtgaacctcccgctgaacccactccagtggcagctcccaaacccgaaccaaagaccgag
gagaaagctgaggaagatgatgggttgggtcttgggttgggcggtggtggcaagagacgg
ccgagaaagaagaagtcgcaagctgcacaagaggcagcagctagtcaagaggctgcagct
gctccagctgtttcagctccaccagctgctaagcccgttgccatagctcctgctgtgcaa
ggtgcggcttccggacctgcccagccacgtgccacatcaacgccgattccatggggcggt
gctggtcgcggtagaggtcgtggagaaccagctcctcccgctaactacccagggcagcaa
caaggaccaggctacccacaacaggcaggaccgcctggcatagcctacccgcagcagcct
gggcccccaatgggctacccacaacaacctgggcccccaatgggctacccgcaacaacct
gggccccctatgggttacccacagcagcctgggcccccaatgggctacccacaacagcca
gggcccccattgggctacccacaacaacctggccccccaatgggctacccacaacagccg
gcgcctccaagaggttacccccaacaagtcgtgcagcaagcggcacagcccactccacat
cctgctccccaaccggcggccccaccggctgggcagcgcgagggttctgcaagtagttca
ggttcaagcgctacctcaagaaccgtgtgccggtataagatacctcgcagaatcgatggt
aacacggtaccctgcacagcagtgagggttgttacgaattatttggagatgaagattaca
ccattgaaaatccatcgatatgacgtttcattcaagccagataggcctaagaagtgtatt
ccacaagtgttcctgctagttaagaaaaagttcttcccaaaggaattgattgcctttgat
caaatgaagaattgctatgccaagaatgctttgcctaacgtccccatgacggaccggttt
accacagaggtggaattgttagatgacaatgggaaaaaaatgaatttcgaagtttcattc
aaattcactggaattgtggatcttaacactattgtgcagtatatgaagacgggcggcaca
tcgctgagccccccaacagaagccattcaatgtgtcgatgtcatcttacgacaaggcact
cttgagtcatacatcaaagcgggtcggcagtttttcaaacggccatacagccccatagac
ctcgggtttggattggaaatgtggacgggcttgttccagtccgcgatcttcacaacgcgg
ccgtttataaatgtcgatgtggctcacaaggggttcccgaaacagcaaaatttgcttcag
gctttcatctcggacttctccatgaacccccacaagcccatcgaacaacagccgaaaaac
gaatacttaacatcattcctcaaaggactcaaggtggtcgcttatataggaggggatacg
tcgcggacaggccagaaacgcgagttcattgtgaacggcctgtctgaaccggcggatcgg
catacattccgtatggatctccccaacggaggccacaagatgatcaccgtagcggaatat
tttcaaaaagtgaagaatgtcaggttgcaatacccccgcctaaattgcgtgtgggtgggc
cccaaggataagaacatctactatcctatggagctccttgaagtggcatatggtcacgcc
cgcaacaagcaactgaatgacaaacagctgtcaactatggtgaaacaagccgcgacgccc
cccgacgaacgtaagcgtaaaatcgaagaagtcatcaaagacatgaactatacaggcaac
aaggatttcaagcagttcggcttggaaatatccgataaattcttcgctgtccaagcgaaa
gtgctgcccgcaccccaattggagaccggcgatccacgtgtgaccacgccaaggaatgga
gcctggaacgcacagaagctgctgaaggcagaaacactgcagcgatggggctttattgtt
atcgagccctcctcgcggttcccaccagattatggtggaatcattgcaatgatcaagagt
tgtggcattcaaatgggcatgactgtgacagagccggtagtgaagcactttaacctgcaa
ataaaggatcttaaaaacatgctgttcaaatgcctggatgaacaagtcaagttcttgttc
atcgtagtttctacgagaggaaaagattattaccacaaggtgaagcaaatggctgagcgc
gatgtggggatcttgactcaatgcatcaaagaatttactgcagaaaagcgtatgaacccg
cagacagtgcgtaacatcctgttaaaggtgaattcgaagctaatgggaatcaaccaggcg
ttggacaaccgctccatgcctgcttgccttaaacaaggccgcgtgatggtcgtaggtgcc
gacgtcacccatccgtctcccgaacagtcggccacgcccagtattgcagcggttacagcg
tcgattgatcccaggtgctttatttacaatattgcactgagcatacagacgccaaagaaa
gaaatgattgtagagtttgaagatatgatggtagagcatctgactctatacaggcagcgt
aatggggccctccctacgaagatcttcgtcttccgcgacggtgtgtccgaggggcaattt
gctcaggtgatgaatagcgaactgttggcggtgcaccaggcttaccagcgtctagcgggc
acggcggccaagcctgaggtactgttcctgctcgtacagaagcgccatcacaccagattg
ttctttgaaaacaacccgagaaacgtggaacctggcacagtcgtagatagagacatcgtg
catgcgacagagttggacttctacttggtgtcgcaccaagccatcaaaggcacggcgcgt
ccaacgcgctaccacgccgtctgcaacgacggcggcttaaagcacgacgaggtggaacag
ctgacatactatctatgccacctttattcgcgttgtatgcgctccgtgtcgtatccgacg
ccgacgtattatgcgcacctcgcttgcttgcgcgctcgctcgcttacttatgaagagaaa
ttcgacaatgccgggttggagaaggcgccaaagagactgcgcgtgctcgacaaatgttgc
agtatagccgtatgttcttcgtgtaactcgaaaacataa
DBGET
integrated database retrieval system
