Choristoneura fumiferana (eastern spruce budworm): 141432272
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Entry
141432272 CDS
T11020
Symbol
Tnpo-SR
Name
(RefSeq) transportin 3
KO
K15436
transportin-3
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03013
Nucleocytoplasmic transport
cfum03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141432272 (Tnpo-SR)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
141432272 (Tnpo-SR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfum03016
]
141432272 (Tnpo-SR)
Transfer RNA biogenesis [BR:
cfum03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
141432272 (Tnpo-SR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
141432272
NCBI-ProteinID:
XP_073949921
LinkDB
All DBs
Position
10:19745912..19764528
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AA seq
905 aa
AA seq
DB search
MDTPSMDTIYQAISALYDNPNANEKEKASKWLGEIQKSIHSWKIADELLQQKKDVHSCYF
AAQTMRSKVQHNLSELPEEARVSLRDSLVAHLSGDLPETSQPILTQLCLALADLALQMPS
WQNCTSDLIKSFSNKNNTALLEILTVLPQEIDSVSLKLGENRREDIRNELRSNTDLVTMF
LKESITNTQNTQLALKIIKCMTSWIQVKAINIQEVPQNAVIAYCLQVLRDYNCINTLHDA
ASDCLCSLLHSLEENNNNEDIERLLFDSIAALEECYHIAVAHEEEEKAANFARIFTELGE
TFLEKIIAATASGQTHFAMRALELVLVCVGHHDYEVAEITFNLWYRLSEDVYRRDYQPLS
DAFKPHIERLIEALARHCQCEPDHTQLPEEGDDFYEFRVKVLELIKDVVFIVGSSCVFRQ
MFAALQADLPWEHTEAGLYVMQAVAKNILPDEYEYVPKVVEAILSMPSGAHPAVRKTCIL
LLGELGEWIERHPSCLEPCLQTLIAALQEPKLAHAAATALQSICKACSKQASAHVVTLLR
AARQLDSLPLPHAAGAALVRALAAALAALPPDQLSVAMREAASIQLDALKALLKEGGAGD
KPRDPCAALDLVAALFRDLSPRAAEACVPALGDVWPVLRDVMLRYQQDGRVMERACRALR
FLLRCTSRRAGPLLAPLSRTMAAIYAQQQHSCLLYLASILVDELAHEPDCVPDLIELLKA
LMPRAFVLLQQDNGLKDNPDTVDDLFRLCIRFLQRIPVEFLSSGALPALVRCAALAAALD
HRDANCSVMKFLHDLLARPHAPRKALADEILQTYSSELTYALIESSVLHLHAYMLGEVAE
VLLDLLRWQKAHNVDHLAAALARLPADRTAAATQQQCWQFHQYALRADKVKEMTRLLRDF
ARLYR
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggatacgccgtcaatggacactatttatcaggccataagtgctctgtacgataacccc
aatgcaaatgaaaaagaaaaggcttcaaagtggctaggagagattcaaaagtcaatacat
tcttggaaaattgctgatgagttattgcagcagaagaaggatgttcactcttgttatttt
gccgcgcagacgatgcgctcaaaagtacaacataacctatcagagctccctgaggaggcc
agggtttcgctaagagactccttggtggcccacctgagtggggacctgccggaaactagt
cagcccatcctcacacagctatgtttagccttagcagacctagcattacaaatgccatca
tggcagaactgtaccagtgatctaattaaatcattttcaaataaaaacaacacagcttta
ctagaaatattgacagtgctgccgcaggagatagactcagttagcttaaaactaggtgaa
aatagaagagaggatattaggaatgaattacgatcaaacacagacttagtgacaatgttt
ttgaaagagagtataacaaatactcaaaacacacagttagcacttaaaattattaaatgt
atgacctcatggatacaggttaaggctattaatatacaggaggtgccacagaatgcggtg
atagcatactgtctacaagtgttacgagattacaattgtataaacacactgcatgatgcg
gcatcagattgcttgtgttcactgttgcacagtttagaagagaataataataacgaggat
atagaaaggttgttatttgacagtatagcagcgctagaagagtgttatcatatagctgtt
gctcacgaggaggaagagaaggcggctaactttgcccgcatctttactgagctaggggag
acgttcctggagaaaattatagcggctactgcttctggtcagactcactttgctatgagg
gcactggaattagttttggtgtgtgtcggacatcacgactatgaggtagcggaaataacc
ttcaacctctggtaccgtctgtcagaagacgtgtaccgccgggactaccagccactgtcg
gacgccttcaagccgcacatcgagcggctcatcgaagccctggcgcgccactgccagtgc
gagcccgaccacacgcagctgccggaggagggggacgacttctatgagtttcgcgtgaag
gtgctggagctgatcaaggatgtggtgttcatcgtggggtcgtcgtgcgtgttccgtcag
atgttcgcggcgctgcaggccgacctgccctgggagcacaccgaggccggcctctacgtc
atgcaggccgtcgccaagaacatactgccagacgaatacgaatacgtccctaaagtggtg
gaagccattctgtccatgccgtcgggcgcgcacccggcggtccgcaaaacctgcatcctc
ctgctgggcgaactgggcgagtggatcgagcgccaccccagctgcctcgagccttgtctg
cagaccctcatcgcggctttacaggagcccaagcttgcgcacgccgccgctactgccttg
cagagcatctgcaaggcgtgcagcaagcaggcgtcggcgcacgtcgtgacgctgctgcgc
gccgcgcgccagctggactcgctgccgctgccgcacgccgccggcgccgcgctcgtgcgc
gctctggccgcggccctagccgccctaccgcccgaccagttgtcggtggcgatgcgggag
gcggcgtccatccagctggacgcgctgaaggctctgctgaaggaaggaggcgcgggcgac
aagccgcgggacccgtgcgccgcgctggacctggtggcggcgctgttccgcgacctgtcg
ccgcgcgccgcggaggcctgcgtgccggcgctcggggacgtctggccggtgctgagggac
gtcatgctccggtaccagcaggacggtcgcgtgatggagcgagcgtgccgcgcgctccgg
ttcctgctgcgctgcacgtcgcggcgcgccgggccgctgctggcgccactgtcgcgcacc
atggcggccatctacgcgcagcagcagcactcgtgcctgctgtacctggcgtccatcctc
gtggacgagctggcgcacgagccggactgcgtgccggacctcatcgagctgctgaaggct
ctgatgccgagggcgttcgtgctgctgcagcaggacaacggactcaaggataacccggat
acggtcgatgatttgttccgcttgtgtatcaggttcctgcagcgtatcccagtggagttc
ctgtcgtcgggcgccctgcccgcgctggtgcgctgcgccgcgctggcggccgcgctcgac
caccgcgacgccaactgctccgtcatgaagttcctgcacgacctactggcgcggccccac
gccccccgcaaggctttggcggatgagatcctccaaacgtactcgtcggagctaacgtac
gcgctgatagagtccagcgtgctccacctgcacgcctacatgctgggcgaggtggccgag
gtgctgctggacctgctgcgctggcagaaggcccataacgtggaccacctggcggcggcg
ctggcgcggctgccggccgaccgcacggccgccgccacgcagcagcagtgctggcagttc
catcagtacgcgctcagggctgacaaagtcaaggaaatgacgcgcctgctcagagacttc
gcaaggctgtatcgatag
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