Choristoneura fumiferana (eastern spruce budworm): 141432409
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Entry
141432409 CDS
T11020
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein
KO
K06052
jagged-1
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
141432409
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cfum04090
]
141432409
CD molecules [BR:
cfum04090
]
Proteins
141432409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
MNNL
EGF_TEN
hEGF
EGF_DL_JAG
DSL
EGF_2
EGF_CA
JAG1-like_EGF2
EGF_Teneurin
EGF_3
EGF_PEAR1L
DUF2721
Motif
Other DBs
NCBI-GeneID:
141432409
NCBI-ProteinID:
XP_073950051
LinkDB
All DBs
Position
11:complement(47461..67077)
Genome browser
AA seq
1198 aa
AA seq
DB search
MPPRAAAALALLTLFHCAAGAGVFELQILEFNNYRLQLASGACCAGAAAAPADACAAPCR
TRFSLCLKEYQSAAAPGACSFGRAASPVLGTDSFTLAEPLYTLALPFSFRWTRSFTLILQ
AYDDYNYTEGEAQAGGEEAGLIEEAWWSGIVEPGAAWHALRHAGAAAGVAYRVRVSCAPN
YHNTTCTTFCRARDDKFGHYSCDATGAKRCLPGWRGDNCEQPVCKEGCHPTHGRCDRPGD
CDCRPGWRGELCAQCQPYPGCKHGYCNGSSWDCTCDTNWGGILCDQDLNYCGTHEPCRHG
GTCENTAPDQYLCTCADGFSGADCERVDNPCAPAPCAHGACALRAAPPGFSCDCAPGWGG
ALCDRDLDDCASQPCRNGGTCHDRLDAFLCECAPGWAGPTCAEGECRSAAPRSSRGALLT
AGRFADVDECAAAEGALGPCVNAAACSNTAGGYACACLAGWTGRDCDANVDDCTGQCLHG
ATCIDLVDDFHCACAAGYAGRTCERDVDDCASRPCRNGGECVDRLDAYTCICPVGFSGVD
CEDDRDHCDGAPCGNGAPCYTAQDDYYCHCAPGWTGKNCTQRAGAELDECASSPCLNNGS
CVDGAGDFSCVCPDGWTGKTCGVLAEISSRCPDGPCANGGSCVVRGGAWRCLCAAGWAGA
SCSTPVAACACAHGGSCAPAPHAAPGWACVCAPGWGGAHCERALDACAARPCRNGGRCRA
GAGWRACDCAPGWAGDDCGQRAPPACGPCPAPAACVPDPDPDRPARCVCPRNARRCLEQI
AGLEVSDGSDWGLEGPASPEGEGADGADGAYGADGADAAPGGCGAHDARGGTWWWGCNAC
WCGSGAPACTRLWCGLPDCLAPGAAPCRNDEVCVPAAPALCLRAPCVMLGECRRVAGRRV
EPPALPAPASCWPGARAAXPPGCARASLQLARERLARGAHVERACSALRRALAAALAAPG
PAAPPPPLTLLCDLAADDDDALDLAIWVGEEESVEGASSAGALALAVRALSDLVARRRLA
HHALLGAALRLRVPHAAPAPAPAPAPAPASAPAPPALLALAALAPVLLLAAAAGAALAVR
RRRRAAAERARRCDEEKSNNLQNEENLRRYANPLPPAGAAAAARAHSLYKAQNADARNNT
PPRDKELTKRALPPPEPPAAPPAPPAPPAPPRPRAAPPAARAPHRARLTPDIYCERVP
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgccgccccgtgccgccgccgcgctagcgctgctcaccctgttccattgcgcggcgggc
gcgggcgtgttcgagctgcagatcctcgagttcaacaactaccggctgcagctggcgagc
ggcgcgtgctgcgcgggcgccgccgccgcccccgccgacgcctgcgccgcgccctgccgc
acgcgcttctcgctgtgcctcaaggagtaccagtcggcggcggcgcccggcgcctgctcg
ttcgggcgcgccgcctcgcccgtgctcggcaccgattcgttcacgctcgccgagccgctc
tacacgctcgcgctgccgttctcgttccgctggacgcgctccttcacactgatcctgcag
gcgtacgacgactacaactacacggagggcgaggcgcaggcggggggcgaggaggcgggg
ctgatcgaggaggcgtggtggtcgggcatcgtggagccgggcgcggcgtggcacgcgctg
cggcacgcgggcgcggcggccggcgtggcgtaccgcgtgcgcgtgtcgtgcgcgcccaac
taccacaacaccacgtgcaccacgttctgccgcgcgcgcgacgacaagttcggccactac
agctgcgacgccaccggcgccaagcgctgcctgcccggctggcgcggcgacaactgcgaa
cagcccgtttgcaaagaaggctgccacccgacccacggacgctgcgatcggcccggagat
tgcgactgccggccgggctggcgcggcgagctgtgcgcgcagtgccagccgtacccgggc
tgcaagcacggctactgcaacggctcgtcgtgggactgcacgtgcgacaccaactggggc
ggcatcctgtgcgaccaggacctcaactactgcggcacgcacgagccgtgtcggcacggc
ggcacctgcgagaacacggcgcccgaccagtacctgtgcacgtgcgccgacggcttctcg
ggcgccgactgcgagcgcgtggacaacccgtgcgcgcccgcgccctgcgcgcacggcgcc
tgcgcactgcgcgccgcgccgcccggcttcagctgcgactgcgcgcccggctggggcggc
gcgctctgcgaccgcgacctggacgactgcgccagccagccctgccgcaacggcggcacc
tgccacgaccgcctcgacgccttcctctgcgagtgcgcgcccggctgggccggcccgacc
tgcgccgaaggtgagtgtcggtcggccgctccccgttcctcgcgcggggccctactgacc
gccggtcgctttgcagacgtggacgagtgcgcggcggcggagggcgcgctgggcccgtgc
gtgaacgcggcggcgtgcagcaacacggcgggcggctacgcgtgcgcgtgcctggcgggc
tggacgggccgcgactgcgacgccaacgtggacgactgcacgggccagtgcctgcacggc
gccacctgcatcgacctggtggacgacttccactgcgcgtgcgccgccggctacgcgggc
cgcacctgcgagcgcgacgtggacgactgcgccagccggccgtgccgcaacggcggcgag
tgcgtcgaccggctcgacgcctacacctgcatctgccccgtcggcttctccggcgtggac
tgcgaggacgaccgcgaccactgcgacggcgcgccgtgcggcaacggggcgccgtgctac
acggcgcaggacgactactactgccactgcgcgcccggctggaccggcaagaactgcacg
cagcgcgccggcgccgaattggacgagtgcgcgtcaagtccgtgcctcaacaacggctcc
tgcgtggacggagccggcgacttcagctgtgtgtgccccgacggctggacaggaaaaact
tgtggcgttcttgcggagatatcgtcgcgttgtccggatggcccgtgcgccaacggcggg
tcgtgcgtggtgcgcggcggcgcgtggcgctgcttgtgcgcggcgggctgggccggcgcg
tcgtgctcgacgccggtcgcggcctgcgcctgcgcgcacggcggctcgtgcgcgcccgcg
ccgcacgccgcgcccggctgggcctgcgtctgcgcgcccggctggggcggcgcgcactgc
gagcgcgcgctggacgcctgcgccgcgcgcccgtgccgcaacggcggccgctgccgcgcc
ggcgccggctggcgcgcctgcgactgcgcgcccggctgggccggcgacgactgcggccag
cgcgcgccgcccgcctgcggcccctgtccggcgcccgccgcctgcgtgccggaccccgac
cccgaccgccccgcgcgctgcgtctgcccgaggaacgcgaggcgctgtctcgaacagatc
gccggactagaagtttctgatggttcggattggggcctcgaggggcctgcgtcgccggag
ggcgagggcgcggacggcgcggacggcgcgtacggggcggacggggcggacgcggctccg
ggcggctgcggcgcgcacgacgcgcgcggtggcacgtggtggtggggctgcaacgcgtgc
tggtgcgggtcgggcgcgcccgcctgcacgcgcctgtggtgcggcctgcccgactgcctg
gcgcccggcgccgcgccctgccgcaacgacgaggtgtgcgtgccggcggcaccggcgctg
tgcctgcgcgcgccgtgcgtcatgctgggcgagtgccggcgcgtggcggggcggcgcgtg
gagccgcccgcgctgcccgcgccggcctcgtgctggccgggcgcgcgggcggcgncgccc
cccggctgcgcgcgcgcgtcgctgcagctggcgcgcgagcgtctggcgcgcggcgcgcac
gtggagcgcgcgtgctcggcgctgcggcgcgcgctggcggccgccctcgccgcgccgggc
cccgccgccccgccgcccccgctcacgctgctctgcgacctcgccgccgacgatgacgac
gcgctcgacctcgccatttgggtcggcgaggaggagagcgtggagggcgcgtcgagcgcg
ggcgcgctggcgctggcggtgcgcgcgctcagcgacctggtggcgcgacgccgcctggcg
caccacgcgctgctgggcgccgcgctgaggctgcgcgtgccgcacgccgcgcccgcgccc
gcgcccgcgcccgcgcccgcacccgcgtccgcgcccgcgccgcccgcgctgctggcgctg
gccgcgctggcgcccgtgctgctgctggcggcggcggccggcgcggcgctggccgtgcgc
cgccggcgccgcgccgccgccgagcgcgcgcgccgctgcgacgaggagaagtccaacaac
ctgcagaacgaggagaacctgcgccgctacgccaacccgctgcctcccgcgggcgccgcc
gccgccgcgcgcgcgcactcgctctacaaggcgcagaacgccgacgcgcgcaacaacacg
ccgccgcgcgacaaggagctgaccaagcgcgcgctgccgccgcccgagccgcccgccgcg
ccccccgcgccccccgcgcccccggcgcccccgcgcccccgcgctgcgccacccgccgcc
cgagcgcctcaccgtgctcgtctgacacccgatatttattgtgaacgagtgccgtag
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