Choristoneura fumiferana (eastern spruce budworm): 141432450
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Entry
141432450 CDS
T11020
Symbol
Polr3A
Name
(RefSeq) RNA polymerase III subunit A
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
141432450 (Polr3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfum03021
]
141432450 (Polr3A)
Enzymes [BR:
cfum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
141432450 (Polr3A)
Transcription machinery [BR:
cfum03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
141432450 (Polr3A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
141432450
NCBI-ProteinID:
XP_073950121
LinkDB
All DBs
Position
11
Genome browser
AA seq
1385 aa
AA seq
DB search
MPKEQYRETDFGRKISHVTFNVDSASDIQQAAHIRVITKNLYAQDGQRVPAAYGVLDRRM
GTNQKNANCDTCGLGLAECVGHYGYIELALPVFHVGYFRSIITILQSICKECSKVMLQEN
VKRSFRRKFMNPELSYLHKKALRAAVLKKAKTCTKCPYCESLNGIVKKSSAGILKIIHDK
YRNKKPTDPLVQKVLHEFHEAKESNKELAAMINSGLIIELSPLQVMNLFRRIPDEDIPLL
GMNVKISRPEDLILTRMPVPPLCIRPSVVSDIKAGTNEDDLTMKQSEILLINDVIARHIA
SGGKTELVQEDWDYLQLHVALYINSELSGIPLAMQPKKPGRGLVQRLKGKQGRFRGNLSG
KRVDFSSRTVISPDPNLQIQEVGVPVHVAKILTYPERVFPANLQWLRRLVRSGPDHHPGA
NYVQQRGLPHKKFLKYGNREKIAQELKCGDIVERHLVDGDVVLFNRQPSLHKLSIMCHKA
KVQPQRTFRFNECVCTPYNADFDGDEMNMHLPQTEEARAEALILMGNKSNLVTPRNGELL
IAATQDFITGGYLITQRDTFFTREEAQQLAACLLAGPDARMPVDMPPPAILKPRRLWTGK
QVFSLILKPNKRCEVKANLETKGKNYTRDKDMCIQDSYVIIRNSELLCGSMDKSTLGSGT
KSSIFYILLRDWGEEHAVRAMWRLARMASYYMMNRGFSFGIIDVTPGKKLIQAKNKLLES
GYSKCDAYILEMEKGTLQCQPGCTMEETLEAVMLSELSSIRELAAKACFRELHTTNAPLI
MAQSGSKGSNINISQMIACVGQQALNGKRVPNGFEDRSLPHFERHSKIPAARGFVENSFY
SGLTPTEFFFHTMGGREGLVDTAVKTAETGYLQRRLVKSLEDLVLQYDMTVRNATGEVVQ
FKYGSDGLDPSFMESGGQPVDLPRVLADVKAQCLHRDEEPLDGDGIVVAAEETLALDDFK
TCTQEFKNELLMFLKTIAAKVRNLRAKYAHCGPIVYQLERLTLTQLVKFIRVCHDKYQRS
VIEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRVKEIINASKNISTPII
TAELLCPLDQEFARRVKGRVEKTTLGEITTYIEEVYLPDECFLLVRLDAERIRLLSLEVN
VDSVIYSICTSKLKVKPGNVQAVSDWALKVRGEPAKHGGWLNMALQQLARQLPAVVVKGL
PQVSRCVIACDDTGGDIKYKLCVEGDGLRDVMATYGVMGTKTTSNNILEVYATLGIEAAK
STIISEIQAVMAGHGMSVDRRHVELLAGQMTARGEVLGITRYGLARMKDSVLNLASFEKT
AEHLFDAAYYGQQDCISGVSESIIVGAPCALGTGVLQLLHAHAHAPPAPHNLLFDDPTYH
NSIWD
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaagaacaatacagggaaaccgactttgggagaaaaatctcccatgtcacattc
aacgtagacagcgcgtctgatatccagcaagccgcgcatatccgtgtgatcactaagaac
ctgtatgctcaggatggccagagggtgccagctgcttacggggtgctggacaggagaatg
ggtaccaaccagaagaatgccaactgtgacacttgtgggctgggcctggcagagtgtgtg
ggccactacggttacatcgagcttgctctgcctgtcttccatgttggatacttccgatcc
atcatcacaatattacagagtatttgtaaggaatgctccaaagtaatgctgcaagagaac
gtaaagagatccttccgccgcaaattcatgaacccagagctctcctatcttcacaagaaa
gccctcagggctgcggtcttgaagaaagccaagacctgcacgaagtgcccgtactgtgaa
tccttgaatggcatagtcaagaagagttcagcagggatattgaagatcatccatgataag
tacaggaataagaagccgacggaccctttggttcagaaggtgttgcatgagttccacgag
gccaaggagtccaataaggagctggctgctatgattaatagtggactgatcattgagttg
agcccattgcaggtaatgaacctgttccggcggatcccggacgaagacatcccgctgctc
ggcatgaacgtgaagatatcccggccggaagacctgatactgacgcgcatgcccgtgccg
ccgctctgcatccggccgagcgtcgtgtccgacatcaaagccggcacgaacgaagacgac
ctaacaatgaaacagtccgagatcctgctgataaacgacgtgatagcgcgacacatcgcc
agcggcggcaagaccgagctggtgcaagaagactgggactatctgcagctgcacgtcgcg
ctctacatcaacagcgagctgtccggcatacctctggccatgcagcccaagaagcctggc
agaggcttggtgcagcggctgaaaggaaaacagggtcgattccgcggcaacctgtccggc
aaacgtgtcgacttctccagccgaactgtcatctcaccggaccccaacttgcagatccaa
gaggtgggggtgccagtacacgtggcgaagatcctgacgtaccccgagcgcgtgttcccg
gcgaacctgcagtggctgcggcggctggtgcgcagcgggcccgaccaccaccccggcgcc
aactacgtgcagcagcgcgggctgccgcacaagaagttcctcaagtatggcaaccgagag
aagatcgcgcaggagctcaagtgcggcgacatagtggagcgccacctggtggacggcgac
gtggtgctgttcaaccggcagccctccctccacaagctgtccatcatgtgtcacaaggcc
aaagtgcagccgcagcggaccttcaggttcaacgagtgcgtgtgcacgccttataatgcg
gattttgacggcgacgagatgaacatgcatctgccgcagacggaggaggccagggccgaa
gcgctcatactaatggggaacaaatccaacttggtaaccccgcgcaacggcgagctgctc
attgcagcgacccaagacttcatcacgggcggctacctcatcacgcagcgggacacgttc
ttcacgcgcgaggaggcgcagcagctcgcggcgtgcttgctcgccgggcccgacgcccgc
atgcctgtcgacatgccgccgcccgccatactgaagccgaggagactgtggaccggcaaa
caggtgttcagcttaatactgaagccgaacaagcggtgcgaagtgaaagcgaatctagaa
acaaaggggaagaactacacgcgggataaagacatgtgcatccaagactcgtatgtcata
atccggaattcagagttgctctgcggctctatggacaagagtaccttaggctcgggtact
aaaagcagcatcttctatatcctgctgcgggactggggcgaggagcacgccgtgagagcc
atgtggaggctagctcgcatggcatcctactacatgatgaatagaggcttcagtttcggc
atcatagacgtgacacctgggaagaagctgattcaggccaaaaataaactgctggagtca
gggtactccaagtgtgacgcttacatcctggaaatggagaagggcacgctccagtgccag
cctggctgcaccatggaggagactctggaggccgtcatgctgagcgagctgagtagcatc
agagaattggctgccaaggcttgtttccgcgagctgcatactacgaacgcacctctaatt
atggcccagagcggatctaaaggatccaacatcaacatatcgcagatgatcgcgtgcgtg
ggccagcaggctctgaacggcaagcgcgtgcccaacggcttcgaggaccgctcgctgccg
cacttcgagaggcactccaagatcccggcagcgcgagggttcgtggagaacagcttctac
tcggggctgacgccgacggagttcttcttccacacgatgggcggccgcgagggcctggtc
gacaccgctgtaaagaccgccgagactggctacttgcagcggcggcttgttaagtccctg
gaagacctggtcctccagtacgacatgacggtccgcaacgcgacgggcgaggtggtccag
ttcaagtacggcagcgacgggctcgaccccagcttcatggagagcggcggccagcccgtc
gacctgccgagggtgctcgccgacgtcaaggctcagtgcctgcacagggacgaagaaccg
ctggatggagacggcatcgtcgtagctgcagaagagaccctcgctctggacgatttcaag
acttgcacacaggaatttaagaacgaactattaatgttcctcaagacgatagcagcgaag
gtgcgcaatttacgagcgaaatacgcgcactgcgggccgatcgtgtaccagttggagcgg
ctgacgctgacgcagctggtcaagttcatccgcgtgtgccacgacaagtaccagcgcagc
gtcatcgagcccgggaccgcggtcggcgcgctcgctgcacagagtatcggcgagcccggc
acccagatgaccctcaaaacgttccacttcgcgggcgtggcctccatgaacatcacgcag
ggcgtgccccgcgtcaaggagatcatcaacgcgtccaagaacatctccacgcccatcatc
accgccgagctgctgtgcccgctcgaccaggagttcgcccgccgcgtcaagggacgcgtc
gagaagaccacgctgggagagataacgacgtacatcgaagaggtgtatttgccggacgag
tgtttcctgctggtgcgtctcgacgccgagcgcatccggctgctgtctctggaggtcaac
gtcgactccgtcatctactctatttgcacatcgaagctgaaggtgaagccgggcaacgtg
caggcggtatcggactgggcgctgaaggtgcgcggcgagccggccaagcacggcggctgg
ctcaatatggcgctgcagcagttagcgcggcagctgcccgccgtcgtggtcaaggggctg
ccgcaggtgtcgcgatgcgtgatcgcttgcgatgacactggcggagacataaagtacaag
ctgtgcgttgaaggcgacggactgagggacgtgatggctacgtacggcgtgatggggacg
aagacaacttccaataatatattagaggtgtacgcgacgctgggcatcgaggcggccaag
tcgacgatcatcagcgagatccaggcggtgatggcgggccacggcatgagcgtggaccgg
cgccacgtggagctgctggccggacagatgacggcgcgcggggaggtgctcggcatcacg
cgctacggcctcgcgcgcatgaaagactccgtgctcaacctggccagctttgagaaaacc
gcggagcacctgttcgacgcggcgtactacgggcagcaggactgcatctcgggcgtgtcg
gagtccatcatcgtgggcgcgccgtgcgcgctcggcaccggcgtgctgcagctgctgcac
gcgcacgcgcacgcgccgcccgcgccgcacaacctgctcttcgacgaccccacataccac
aactccatatgggactag
DBGET
integrated database retrieval system
