Choristoneura fumiferana (eastern spruce budworm): 141432535
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Entry
141432535 CDS
T11020
Symbol
PolE1
Name
(RefSeq) DNA polymerase epsilon catalytic subunit 1
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03030
DNA replication
cfum03410
Base excision repair
cfum03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
141432535 (PolE1)
03410 Base excision repair
141432535 (PolE1)
03420 Nucleotide excision repair
141432535 (PolE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfum03032
]
141432535 (PolE1)
03400 DNA repair and recombination proteins [BR:
cfum03400
]
141432535 (PolE1)
Enzymes [BR:
cfum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
141432535 (PolE1)
DNA replication proteins [BR:
cfum03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
141432535 (PolE1)
DNA repair and recombination proteins [BR:
cfum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
141432535 (PolE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf-DPOE
zf_DPOE_2
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
CAP-like_CFAP184
Motif
Other DBs
NCBI-GeneID:
141432535
NCBI-ProteinID:
XP_073950246
LinkDB
All DBs
Position
11:4729468..4767806
Genome browser
AA seq
2298 aa
AA seq
DB search
MVYQNTGKYRSDKNESKRDAGPSSSGTREESSESRIRVAMDSDRIDSKYGFDRVRDAKER
TGYLINMHTAEVLDEDKRLVAAMDYYFIEMDGARFKISLTFQPYFLILARKECEQEVIQY
LSKKFAGTIHKIEIVEKEDLDLLNHLSGLKQRYIKLSFMSQNELMKVRREILTAVNKNKE
REKKDSIYAEMLTNALTSAAAIEHAKKTTDHMENILDIREHDVPFHVRVSIDMKIFCGTW
YTVKSRGTEPPLFTKRDDILERPDPIVLAFDIETTKLPLKFPDSQTDQIMMISYMIDGQG
YLITNREIISVDVEDFEYTPKPEFEGQFIIFNEANEMALIQKFFDHILDVKPHIFVTYNG
DFFDWPFVEARAAILGLDMKQEIGFSKMAARDGTYACRPAMHMDCLCWVKRDSYLPVGSQ
GLKAVAKAKLRYDPVELDPEEMCRMAAEQPQVLSNYSVSDAVATYYLYMKYVHPFIFALC
TIIPLEPDEVLRKGSGTLCESLLMVEAFHANIVFPNKQVEQLNKLTSDGHVLDAETYVGG
HVEALESGVFRADIKCKFRIEPTAVDKLMETIEKTMRHAIEVEEGIPLNLVTNFDEVCAE
IKGKLQHMRDHPRRDENPLIYHLDVGAMYPNIILTNRLQPSAMVNTQVCAVCDYNRPNAA
CQRNMEWMWRGDFLPATRSEYQRIQQQLETEKFPPLHPGGPTRAFHTLPKEDQAAYEKKR
LADYCKVAYKKTKVTRTEVRTTTICQKENSFYVDTVRAFRDRRYEYKGLNKQAKAKVAEA
VASGDAAEIKSAKSREVLYDSLQLAHKCILNSFYGYVMRRGARWHSMEMAGIVCYTGANI
IMKAREIIEQVGRPLELDTDGIWCILPASFPENVTVLTTHQKKKKINVSYPNAVLNAMVK
DHFTNDQYFELKDPATKTYEQRAENSIFFEVDGPYLAMVLPASKEEGKKLKKRYAVFNFD
GSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGNDLKSCYGSVAKVADYWLDVLYSKGS
NMPDSELFELISENRSMSKKLEDYGGQKSTSISTAKRLAEFLGDQMVKDAGLACRFIISR
KPEGAPVTERAIPLAIFQSPGGVKRHHLRRWLKDSSISEDVDIRDVLDWGYYIERLSGAI
QKIITIPAALQGLDNPVPRVQYPDWLHKKMLAKTDKFKTRKITDMFSAQPKEKQDDDGGN
DRENGTTEVDMEDIGKASERPPLRPVVTKRKREEAPREPETWREAFGAPPPFGTTKAERR
AWILFQKKKWKWQIEQRKNANRSKRGRMDNESSMPPPRSMGPAGTLGSFIKRAQRTLLNT
PWQIIQVYETSEPGLFRLWALVGSDLHQIKLTVPRIFYVNSRVARPADSGSYWRKCSRVL
PRAHPAIHLYQYTVPEQLYREHQEELIGELSAPEIEGIYETQMSLEFRVLMQLGCICVVD
PQEARRLIQQGSNSDSFTLNQLQFKSVAYQAYLQIQNGVPPLKHIYLYQHAAPNSARSMW
ALVLGPTKKAYIIVQDTVKTNQMPNMNTLYAAERTAKINLGTEESSLPGAELTWEVFVET
EPRAALRRIGRALQRYREEQPGPTLLALQTLHSAPRLLALLPGISEFPLVSLAARDVDSL
FQALEWQRVGARAAVRHYLGLPAVLSEMVEQCSYFHVPLGNVPADAALFGADLFYARQLA
KHNFVLWCSHLERPDLGGRETDDNRLVSEVEEMSGCSHNASGAYDSVCVELETNRLCESA
LLQAQLILQHEGTSVATAFSRQPLAADTAGTTITNRLCESALLQAHLILQHEGTSVATAF
SRQPLAADTAGTTITNRLCESALLQAQLILQHEGTSVATAFSRQPLAADTAGGTPSVNYD
ETAQCSAAFRVLRTTLAVWLRDQAMHQNLYAGYLVQHFYRWLKTPTSLLYDPALRRTLYG
LMKKLFLMLVAELKRLGSVIVHADFTRILVCTKKKNVLDGIGYVEFVAQSIRNKELFHAV
TFDYRQCWTYLLWLDQANCAGVLGKIPDGAQEVGNLQLPTTETEENVRDEDGEIVMSWNL
ALFLPRGVRAPFAAAVSGLLGAAVAAPGRLPAMLAGEIAQKLFQMTEQIHTRMPVLKPGD
LEPRPGRRGGPGGAGGAPPALQFVNALCKVIALNPALDEQITLLRRNLLRLLGVGEFSAA
AEWHDPCATCVLSEVICKVCNLCRDLDLCRETNVNTDGDVPVCVCQCGAPYDSQELEWRL
TEAMNRRAMAYTLQDLICARCHQVKRDNLSTVCDCAGDFSLLMPVKEVLTQLETFKSIAE
YYKMPLLLEQIDFHLNNM
NT seq
6897 nt
NT seq
+upstream
nt +downstream
nt
atggtctatcagaatactggtaaatataggtcagataaaaatgagtctaaacgagatgct
ggaccatcgtcatcaggcacacgggaggagtcttcagagtcacggatccgcgtggccatg
gatagcgacaggatcgattccaaatacggctttgatagggtccgcgacgccaaagagaga
acaggctacctgattaacatgcacacagctgaagtgttggatgaggataagcggttagtg
gcagctatggactattactttattgagatggacggagcacggttcaagatctccctgacc
ttccagccttacttccttatcctggcacggaaggagtgcgagcaggaagtcattcagtat
ttgtctaaaaagtttgctggcacaattcacaagattgaaattgtagaaaaagaagatttg
gacttgctgaaccacctctcaggtctcaagcaacggtacataaagctctcattcatgtcg
caaaacgaattgatgaaagtgcgtcgtgagatccttacagctgttaataagaataaagag
agggagaagaaagattccatctatgctgagatgctcacaaatgcactaacaagtgcggcc
gctattgagcacgcgaagaaaaccactgaccatatggagaatatattagacattagggaa
cacgatgtgcctttccacgtccgagtgtctatcgacatgaagattttctgcggcacttgg
tacaccgtcaagagccgcggcacggagccccctctcttcaccaagcgcgacgacatcctc
gaacgacccgaccctattgtcctagccttcgacatagagaccactaaactgccactaaag
ttccccgattcacagactgaccagattatgatgatttcttacatgattgatggacaaggc
tacttgattactaatagagaaattatatctgttgatgtcgaggattttgaatacactcct
aagcctgagtttgaagggcaattcataatttttaacgaagccaatgaaatggcattaata
cagaagttttttgatcacattttggatgtcaaacctcacatatttgtcacatataacggc
gatttcttcgattggccgttcgtggaggcgcgggctgctatcctcggcctggacatgaag
caagagatcgggtttagtaagatggccgcaagagacggcacgtacgcttgccgccccgcc
atgcacatggactgtttatgttgggtcaagagagattcctacttgcccgtcgggtcccaa
ggcttgaaagccgtggccaaggcgaagctgcggtatgaccctgtggagttagaccctgaa
gaaatgtgcaggatggcagctgaacaaccacaggtcctatccaactattcggtgtccgac
gccgtagccacgtattacttgtacatgaaatacgtgcatcctttcatatttgccctgtgt
actattatccctttggagccagatgaggtgctccgcaagggttcaggcacgctgtgcgag
tctctgctgatggtggaagcgttccacgccaacatagtgttccccaacaagcaggtcgaa
caactgaacaagctgacctccgacgggcacgtgctcgacgcagagacctatgtcggcggg
cacgtggaggcactcgaatcaggtgtcttccgcgccgatataaaatgcaagtttcgaatc
gagcctacagcggtggacaaactaatggaaaccatagagaagaccatgagacacgccata
gaggtggaagaggggatacctctgaacctggtcactaatttcgacgaggtttgtgcggag
atcaaggggaaattgcagcacatgcgggaccatccgaggagggatgaaaaccccttgata
taccatttggatgtgggtgctatgtaccctaatattatcttgactaataggttgcaacct
tcagcgatggtgaatacacaggtgtgtgcggtgtgcgactacaaccggccaaacgccgcg
tgccagcggaacatggagtggatgtggcgcggcgacttcctgccggcgacgcggagcgaa
taccaacgcatccagcagcagctggagactgagaaattccccccactgcaccccggcggg
cccaccagggctttccatactctgcctaaggaagatcaggcggcgtacgaaaagaagcgt
ctagcggattactgcaaagtggcttacaagaagactaaagtgacgcgcactgaggtgcgg
accacaaccatctgccagaaagagaactccttctacgtcgatactgtgcgagccttcaga
gatcgtcgctacgaatacaaagggctaaacaagcaggccaaagccaaagtggcggaggcg
gtggcgagcggcgacgcggccgagatcaaatccgccaagagcagagaagtgctgtacgac
tcgctgcaactggcgcataagtgcatcctcaactcgttctacggatacgtcatgagacga
ggtgctcgctggcacagcatggaaatggctggtattgtgtgctacacgggagcaaacatc
atcatgaaggcgagagaaatcatcgagcaagttggacgacctttggagttggacactgac
ggaatctggtgtattctgccggcgtcctttcccgaaaacgtgacggtcctcaccacgcac
cagaagaagaagaaaatcaatgtttcctaccccaatgcggtgctaaatgccatggttaag
gatcatttcactaacgaccagtatttcgagctaaaagacccagcgaccaaaacatacgag
caaagggcggagaactcaattttcttcgaagtcgacggcccttacctggcgatggtgtta
ccagcttcgaaggaagaaggcaagaagctgaagaaacgatacgctgtgtttaactttgac
ggatctctggctgaactaaaaggattcgaggtaaaacggcgcggcgaactccaactaatc
aagatattccaatcatcagtgttcgaagcgttcctcaaagggaacgacctcaagtcctgc
tatggttccgtggccaaggtcgccgactattggctggacgtactttacagcaagggctcg
aacatgcccgattcggagctgtttgagcttatctcggagaatagatcgatgtcgaaaaaa
ttagaagactatggtggacagaaatcgacgtcgatatccacggcgaaacggctggctgag
ttcctgggcgatcaaatggtgaaggatgctgggttggcttgcaggttcataatatcccgc
aagccggaaggcgcgccggtgaccgagcgagcgattcctctcgccatcttccagtccccg
ggcggcgtcaagcggcaccacctgcgacgctggctcaaggattccagcatcagcgaagac
gtcgatatccgggacgtgttggactgggggtactacatagagcggctcagtggggccata
cagaagatcattactataccagccgcgctgcaagggttggacaaccctgtgcctcgcgtg
cagtatcccgactggttacacaagaaaatgctcgccaagacggacaagttcaagactcgc
aagatcacagacatgttcagtgcgcagcctaaggagaaacaggacgatgatggcggcaat
gaccgggaaaacgggaccacagaagtagacatggaagacataggcaaggcgagcgagcgg
ccgccgctgcggcccgtcgtgaccaaacgcaagcgcgaggaggcgccgcgggagcccgag
acgtggcgcgaggcgttcggcgcgccgccgcccttcggtaccaccaaggcagaacgcaga
gcctggattctgttccaaaagaagaaatggaaatggcaaatcgaacagagaaaaaatgct
aacagaagtaaaagaggtagaatggacaatgagagttcgatgcccccgccgcggagcatg
ggcccggccgggactctcggcagcttcatcaagcgagcgcagcgcactctgctgaatact
ccctggcaaattatacaggtttatgaaacttcagagccgggcctcttccgtctgtgggcg
ctggtcggctccgacttgcatcagatcaagttgacagtgccccgtatattctacgtgaac
tcgcgagtagctcgcccggcggacagcggcagctactggcgcaagtgctcgcgcgtgctg
ccgcgtgcgcatcccgcgatacatctgtaccagtacacggtgcctgagcaattgtacagg
gagcaccaggaggaactcatcggcgagctgtcggctccggaaatagaaggcatatacgaa
acacagatgagcttagagttccgggtgctgatgcagctaggctgtatttgcgtcgttgat
ccgcaagaagcaagacggctaatccagcaaggctcgaattcggactcgttcacactgaac
caactccaatttaaaagcgtggcgtatcaagcgtatcttcagatacagaacggcgtacct
ccactaaagcatatctacctataccaacacgctgcgcccaactccgctcgaagcatgtgg
gcgctcgtactgggacccacgaagaaagcctacattatagtacaggacaccgttaaaacc
aaccagatgcccaatatgaacacgctgtatgccgccgagaggacagccaagataaatctc
ggcacagaagaaagcagtttacctggagcggagttgacgtgggaagtgttcgtggagacc
gagccgcgcgccgcgctccgccggatcgggcgcgcgctccaacggtaccgcgaggagcag
cccggccccacgctactggcgctgcagacgctgcatagcgcgcctcgcctgctggcgctg
ctgcccggcatatcagagttcccgctggtgagcctggcggcgcgcgacgtggactctctc
ttccaggcgttagagtggcagcgcgtgggcgcgcgcgccgccgtccgccactacctgggg
ctgcccgccgtgctcagcgaaatggtggaacagtgcagctacttccacgtgccgctgggc
aacgtgcccgcggacgcggcgctgttcggcgcggacctgttctacgcgcggcaactcgcc
aagcacaacttcgtgctgtggtgctcgcacctcgagcggccggacctgggcgggcgcgag
acagacgacaaccgactagtaagcgaggtggaagaaatgtcgggctgcagccacaacgcg
tcgggcgcgtacgactccgtgtgcgtggagctggagactaacaggctgtgcgagagcgcg
ctgctgcaggcgcagctgatactgcagcacgagggaaccagcgtcgccactgccttcagc
aggcagccgctggccgcagacacagctggtaccactatcactaacaggctgtgcgagagc
gcgctgctgcaggcacacctgatactgcagcacgagggaaccagcgtcgccactgccttc
agcaggcagccgctggccgcagacacagctggtaccactatcactaacaggctgtgcgag
agcgcgctgctgcaggcacagctgatactgcagcacgagggaaccagcgtcgccactgcc
ttcagcaggcagccgctggccgcagacacagctggtggaaccccgtcggtgaactatgac
gagaccgcgcaatgcagcgcggcgttcagagtgctgcggacgacactcgccgtctggctg
cgggaccaagccatgcatcagaacctgtacgccgggtacttggtgcagcacttctacaga
tggctaaaaaccccgacgtccctgctctacgacccggctctccggcgcactctgtacggg
ctcatgaagaagttgtttctcatgctggtagcagagctcaagcggctcggctccgtcata
gtgcacgcggacttcaccaggatactggtgtgcactaagaagaagaatgtactcgatggg
attggttacgtggagttcgtggcgcagagcatccgcaacaaggagctgttccacgcggtc
accttcgactaccgccagtgctggacctacctgctgtggcttgaccaggccaactgcgct
ggcgtgctgggtaaaatacccgacggtgcacaggaagtcggaaatttgcagctgcctact
accgaaaccgaagaaaacgttcgtgacgaggacggcgagattgtgatgtcgtggaacctg
gcgctgttcctgccccgcggcgtgcgcgcgccgttcgcggcggcggtgagcgggctgctg
ggcgccgccgtcgccgcgcccggccgcctgcccgccatgctcgccggggagatcgcacag
aaactcttccaaatgacagagcagatccacactcgcatgccggtgctgaagcccggtgac
ctggagccccggccggggcggcgcggggggccgggaggcgcggggggcgcgccgcccgcg
cttcagttcgtcaacgcgctctgcaaggtcatcgccctcaaccctgcgctagacgaacag
ataacgctcctccgacgcaacttgctgcggctactaggcgtaggagagttcagcgcggcg
gcggagtggcacgacccgtgcgccacgtgcgtactcagcgaggtcatctgcaaggtgtgc
aatctgtgccgggacctcgacctgtgccgcgagactaacgtcaacaccgacggcgacgtt
ccggtgtgcgtgtgccagtgcggcgcgccgtacgacagccaggagctggagtggcggctc
acggaggccatgaatcggcgcgccatggcctatactctgcaggacctcatctgcgcgcgc
tgccaccaggtgaagcgtgacaacttatcaacagtctgtgactgtgccggagacttcagc
ctgctcatgccagtcaaggaggtgctcactcaactggagacattcaagtctatcgcagaa
tactacaagatgccactgctactagaacaaattgattttcatctgaataacatgtga
DBGET
integrated database retrieval system
