Choristoneura fumiferana (eastern spruce budworm): 141432592
Help
Entry
141432592 CDS
T11020
Symbol
Srp54k
Name
(RefSeq) signal recognition particle 54k
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03060
Protein export
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
141432592 (Srp54k)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cfum02044
]
141432592 (Srp54k)
Enzymes [BR:
cfum01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
141432592 (Srp54k)
Secretion system [BR:
cfum02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
141432592 (Srp54k)
Eukaryotic Sec-SRP protein
141432592 (Srp54k)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
SRPRB
nSTAND3
AAA_17
AAA_22
ResIII
DUF2209
AAA_33
MMR_HSR1
cobW
PduV-EutP
nSTAND_NTPase5
CbiA
AAA_16
AAA_18
MobB
Zeta_toxin
ATP_bind_1
NPHP3_N
AAA_25
6PF2K
APS_kinase
Motif
Other DBs
NCBI-GeneID:
141432592
NCBI-ProteinID:
XP_073950334
LinkDB
All DBs
Position
11:complement(6500551..6509025)
Genome browser
AA seq
500 aa
AA seq
DB search
MVLADLGRKITTALQSLSRATIINEEVLNSMLKEICAALLEADVNIRLVKNLRENVRAVI
DFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKPYQPVKGKPNIIMFVGLQGSGKTTTCTK
LAYHYLRKNWKSSLVCADTFRAGAYDQVKQNCTKARIPFYGSYTEVDPVVIATTGVEMFK
KEGFEMIIVDTSGRHKQEESLFEEMLAVANAIKPDNIIFVMDATIGQACEAQARAFKEKV
DIGSVIITKLDGHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFINKLLGMGDI
EGLLDKVNELKLDDNDELLEKLKHGQFTLRAMYEQFQNIMKMGPFSQIMGMIPGFSQDLM
SKGSEQESMAKLKRLMTIMDSMNEGELDHRDGAKLFSKQPTRITRVAQGAGVTERDVKDL
IAQYTKFAAVVKKMGGIKGLFKGGDMAKNVNQTQMAKLNQQMAKMMDPRILQQMGGMSGL
HNMMRQLQQGSSGNSLMGGK
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggtattagcagatttaggtcggaagatcaccacagccttacagtcccttagtcgggct
accatcatcaatgaagaagttcttaattctatgctgaaagagatatgcgcagccctattg
gaagcagatgtgaatattcgtttggtaaagaacctccgggagaatgtacgtgcagttatc
gatttcgacgaaatggcagggggcctcaacaagcgccggatgatccagtcagctgtgttc
aaagaacttgttaagcttgtagacccaggagtaaaaccctatcagccagtaaaaggaaag
cccaacatcatcatgtttgtagggctgcaggggtccggcaaaaccacaacatgtacgaag
ctggcttaccactacttgaggaagaattggaaatcaagtttagtgtgcgcggacacattc
agagccggtgcctatgatcaagtcaaacaaaattgtaccaaagctagaatacctttttat
ggaagttatacagaagtagatccagtagtaatagccaccactggtgtggagatgttcaag
aaggaaggcttcgagatgatcattgtggacacaagtggaaggcacaagcaggaggagtcc
ctgttcgaagagatgttggctgttgccaatgccattaaaccagacaacataatcttcgta
atggacgccacaataggtcaggcctgcgaggcgcaagcgcgggcgttcaaagagaaggtg
gacattgggtcagtcatcatcaccaagttggacggccatgccaaaggaggtggtgcgctt
tcagctgtagcagcaacacagagtcccatcattttcataggcacaggagagcacatagat
gatctagaaccattcaagacaaaaccgtttatcaacaaactcctaggaatgggtgacatt
gagggccttttggacaaagttaacgaactgaaactagatgataatgatgagctgttggaa
aaactgaagcacgggcagttcacactgcgggctatgtacgagcagttccagaacatcatg
aaaatgggaccattctcacagattatgggcatgatcccagggttctcccaagacttgatg
tcaaaaggcagcgaacaggagtcaatggccaaacttaaacgactcatgaccatcatggac
tccatgaatgaaggcgaattagatcaccgtgatggtgcaaagttattctcaaagcagccc
acgcgcataaccagagtggcgcagggcgcaggcgtcaccgaacgtgatgtcaaggacctt
attgctcagtacactaaattcgcagctgtagtcaagaaaatgggtggcatcaaaggcttg
ttcaaaggcggcgacatggcaaagaacgttaatcaaacacagatggctaagctcaaccaa
caaatggctaagatgatggaccccagaatcctacagcagatgggtggcatgtcgggactc
cacaacatgatgaggcagttgcagcaaggctcgagcgggaatagtctgatgggcggcaaa
tga
DBGET
integrated database retrieval system
