Choristoneura fumiferana (eastern spruce budworm): 141432647
Help
Entry
141432647 CDS
T11020
Name
(RefSeq) cell adhesion molecule Dscam2-like isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cfum04515
]
141432647
Cell adhesion molecules [BR:
cfum04515
]
Immunoglobulin superfamily
Other
141432647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
Pur_ac_phosph_N
C2-set_2
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
141432647
NCBI-ProteinID:
XP_073950440
LinkDB
All DBs
Position
11:complement(7454209..7520697)
Genome browser
AA seq
1614 aa
AA seq
DB search
MVPGKRIYECRPKGIGSHSRVLIETCSTLGGSSSQSCVYKCYEDSKLFVEDKLGISQGRS
TAFSDSKDIIEKSGNASRIYVTKKGTKQTTLHKCTIIQLKKYRQLFRNKTPKAYKFNSSR
KFYFEGREKNETWCSLTKQVVYTTKRTRAKRSLDSRPELVYTFIEQAVQPGAQVALKCSA
VGEPPPRFKWTLDSQPIPLHLGAVITEGRENGPAGMGPSGNYVLSTLSLSSAQVEHGGRY
ECRASNAHGSIAHAARLNVYGPPYIRAMSPVKAVAGSDTTVWCPYYGFPIDSVTWEGGAG
TDARYQQIDGQLTISNVDRNRDQGSWICSVLTPGGELARRDVQITVVSPPVLSPIVFPPG
LRSGDRSQLTCTVTSGDMPVYFSWLKDQMNIPSALQVDERGAEFYSMLLFKSLTAAHSGL
YTCVVTNTAGKANASAELAIKVPPYWHIEPSDSAVLLNGSLTVSCEARGHPPPAVYWTKF
SGGTETTLGAVSEPAVLSNGSLRLESARAEHSGKYRCRADNGVAPALSKSLTIHINEPAR
FETPSVNVTAKLGETVRLACLARGDSPLSTSWSHSGRALPNSDYRMSISETRSAEGLRSE
LVVERADRRDSGVYRCQASNPYGRSDHFVHLAVQEPPEPPSNFRVLETTSRSVRLQWRRP
YDGNSPVLGYVVQYRKHDSTNSDSWRDADTHNVSVSAHNADTYSETEGATISGLEPATAY
LVRARTVTAQFASAHTRALLALTSHEPPARAPLSLRASAPRTSTIELTWQPPPSSTWNGE
LLGYSVWWWASADGTLSGGANVGMEFATVRGLITKYTIESLEHYTRYSVSVRAFNSAGAG
PATAPVNTVTQESVPSEGPRGVRCRAVSPQSLKVEWSPPPAHAHHGSLLGYKLLYRPEHT
AEWLEWEVRGSGGLNSGAGAEVKRVAGVETLLLALKPYTNYTVQALAYTAAGDGVPAHPV
HCTTQQDAPGPPAAVKVVATSVTSLAISWLPPSRPNGPVLYYTVFYRELGRDRPPQTTTV
QAEDSDPSVGLGGSTELRSLSEDATYEAWVAAHSAAGEGEPSAPQPATTSSRAGVRLLSF
GVWARVQCGHALRLACVWRGEPTPRARWLRGDRPVTHDPRTHLTLHGHLAIHEVDASTSG
NYTCSARNAYGSEETTYRVECAAPPAAPALLLEHAAHREARLAWRTAHHSAAPPHGFTIW
WIRVRDDSGDGLDTGTRGEEERKLETGGEATGVTLRGLSCGASYSVRVVAHSRAGPSPPS
APLLVKTKPPVLVWEGGGDHRERQEEGAEAAVWSNSSALALDARRAVRCGARLVRLQWRR
ADAGAALWTDADLTSLHHHREIVIGGLTAGAWYGLRLWTATDSARHQAIIYAATTTHAGE
RLRRPVAFQSEGSSVSTVSNAEAERVLGAVSLAFAALAAVAVTALLLVLLAKRSTLWPCV
VPVDEETRRCSHSVASTDKSVCPEQQNIRNCQHDYKHDKLSPASDVYEISPYATFAVGGE
TAATLDHTLQFRTFGHRDNDAPPHRPCRKHPQRHRDRGDVEKHHSDCELQQLSRYEKVRP
RHCAGTSYCVPLAHHGGGGSGVGGGSGFSEVYAGDSSAESGPGSLSPRTHHEHS
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctggcaagcggatctacgagtgtcgaccgaaagggatcggttcccacagcaga
gtactgattgaaacgtgcagcactttaggtggctccagttctcagtcctgtgtttataag
tgctatgaagactcaaaattgtttgttgaagacaaacttggaatcagtcaaggcagaagc
acagcgtttagcgacagcaaagatataatagaaaagtctggaaacgcaagtcgcatctat
gttacaaagaaaggcactaagcagacaacgctacataaatgcaccattatccagctaaag
aaatatcgacaactatttcgaaacaaaacgccaaaagcttacaagttcaattcttcgagg
aaattctattttgagggacgcgagaaaaacgaaacatggtgctcattaacgaaacaagtt
gtgtatacaacgaaaaggacgcgtgcgaaacgttcgttggattctcgaccggagttagta
tacacatttatagagcaagcagtgcagcccggagcacaggtagctttaaagtgttcagcg
gttggcgaaccaccgcctcgtttcaaatggactctggactcccaaccgatacctcttcat
ctcggggccgtaataaccgaaggccgtgagaatgggccggcggggatgggccctagcggg
aactatgtgctgtctacactgtcgctgagcagtgctcaagtggagcatggtggtcggtac
gagtgccgcgcgagcaatgctcacggttccattgctcatgctgcgaggctcaacgtctac
ggtccgccctatattcgagctatgagccccgtaaaagccgtcgccggctccgataccacg
gtatggtgtccttactacggatttcctatcgactccgtgacttgggaaggaggtgccggt
acagacgctaggtatcaacagatcgatggccagttaactataagcaatgttgaccgaaat
cgcgaccaaggctcttggatttgctcggttctgacccctggaggtgaactggccaggcgt
gacgtacaaataacggttgtctccccgcccgtgctctcccccatcgtgtttccacccggc
ttgagatccggggaccgctcacagctgacttgcactgtgacctctggcgacatgcccgtg
tatttctcttggctcaaagatcaaatgaatatacctagcgcacttcaggtcgatgaacga
ggagccgaattttatagcatgctgctattcaaaagtctgactgccgctcacagcggatta
tacacgtgtgttgtcaccaataccgccgggaaagctaacgcgtctgctgaattagctatc
aaagtgcctccgtactggcatattgagccttcggactcggctgtattgctcaacggatcg
ctgactgtaagctgcgaggctcgcggccatcctccccccgctgtttattggaccaaattc
tctggtggcactgagacgactcttggagccgtgtctgagccagcagtgctgagcaatgga
tctctaagactagaatctgcaagagcggaacattcaggaaaatatcgctgcagagccgac
aatggggttgcgcctgcgttgtctaaatcactcacaatacatattaacgaaccggcgaga
tttgaaacaccatctgtaaatgtaacagcgaaactaggagaaacagtgaggttagcatgt
cttgctcgaggggatagtccactttcgacatcctggagccactcaggacgggctttgccc
aattcggactacagaatgagtatttcggaaacgcgaagcgcagaagggttaagaagtgaa
ttagttgtagaacgtgcagatagaagagactctggtgtctatcgatgccaagcgtccaac
ccttacggaagatctgatcatttcgtacaccttgctgtacaagagcctcctgagccacct
tcaaacttcagagtcctcgaaacaacgtcccgatccgttcgtctgcaatggcgacgccca
tacgatggcaattcgccggtcttgggctatgtggtgcagtatcgtaaacatgactcgacc
aattctgactcctggagggatgctgacacacacaacgtatccgtgtctgcgcacaatgcg
gacacttattcagagacagagggagccacaataagtggcctggagccagccacagcttac
ctagtgcgagctcgaacagtcactgctcagtttgcatcagctcatacccgtgcgttgctc
gcgttgacgtcacacgagccaccagcgagggcaccgttgagtcttcgtgcttccgcacct
cgaacttctacgattgagttaacttggcagcctcctccgtcttccacctggaacggggaa
ctcctgggatattcagtttggtggtgggcatcagctgacggtactctctcgggaggtgcc
aatgttggtatggaatttgccacggtacgaggactgatcaccaaatatactatcgagagt
ttggaacattacaccagatattctgtaagcgtcagagcctttaacagtgcaggggcaggt
ccagccactgcgcctgttaataccgtgacacaagaaagtgtgccttcagaaggtccccgc
ggagtgaggtgccgcgccgtgtccccccagagcttgaaggtggagtggtccccgccgccg
gcgcacgcgcaccacggctccttgctcgggtacaagctgctttaccgcccggagcatacg
gcagagtggctggagtgggaggtgcgcggcagcggcggcctcaactcaggagcgggggcg
gaagtcaagcgggtagcgggagtcgaaacgctacttctcgcactgaaaccgtacactaac
tacacggtacaagctttggcgtatacggcggcgggagatggagtgcccgctcaccctgtg
cattgtactacacaacaagatgccccagggcctccagctgcagtgaaggtcgtagcaaca
tcagtgacttccttggctataagctggttgccaccaagtcggcctaatggacctgtgctt
tattatacagtattttatcgagaactaggcagggaccgtcctcctcaaacgacaacagta
caagcagaagacagtgatccatcggtgggtttgggcggttctaccgaactgcgatcctta
tccgaagacgctacgtacgaagcgtgggtggcagctcactctgcagccggggagggagag
ccctctgctccacaaccagctacaactagctctagagcgggagtacgtttgctctcattc
ggcgtgtgggcgcgcgtgcagtgcgggcacgcgttgcgcctcgcatgcgtgtggcgtggc
gagccgacgccgcgcgcgcgctggctgcgaggcgacagacccgtcacgcacgacccccgg
acgcatctcacgttacacggacacctagctatacatgaagtggacgcttctacgagcggc
aactacacgtgttcggcgcgcaacgcttatggctcagaggagacgacgtaccgcgtggag
tgcgccgcgccgcccgctgcgcccgcgctgctgctcgagcacgcggcgcaccgcgaggcg
aggctcgcttggcggactgcgcaccactctgcggcaccaccacacggtttcacgatatgg
tggatacgggtccgcgacgacagtggcgacggcttggacacggggaccaggggtgaggag
gaaaggaagctggaaacagggggggaagcgactggagtgaccctgagggggttgtcttgt
ggagcttcgtactctgtgagggtcgtggctcattctcgggcagggccgtcgccgccgtcg
gcaccgttgttggtgaagacgaaacctccagtgttagtatgggaaggagggggagaccat
cgcgagaggcaagaagagggcgccgaagcggccgtctggagcaacagctccgccctagcg
ctggacgcgcggcgagccgtgcgttgcggcgcgcgcctcgtgcgcctgcagtggcggcgc
gccgacgccggcgcagcgctgtggactgacgcggaccttacctcactgcaccaccacagg
gagattgttattggaggcctgacagcgggcgcgtggtatggtttgcggttgtggacggcc
acagactcggcccgacatcaagctattatttatgctgccaccactacccatgctggggaa
cgccttcgtcggccagtggctttccagtccgaaggcagttctgtgagtactgtgagcaac
gcagaagcagagcgagtgctcggagcggtctcgctcgctttcgccgctctcgctgcagtc
gctgtgactgccttactgcttgtgctattggccaaaagaagcacactgtggccatgcgtg
gtcccggtggatgaggagacccgtcgctgcagccactcagttgccagcaccgacaagtcc
gtttgccccgagcaacagaacattcggaactgccagcatgattataagcatgacaagctg
tcaccagcctcagatgtgtacgagataagtccgtacgcgacatttgcggtgggaggcgag
acggctgccacgctggaccacacgctgcagttccgtaccttcgggcatcgcgacaacgac
gcaccgccgcaccgaccctgcaggaaacacccgcagaggcatagggatcgaggcgatgta
gagaagcatcactcagactgcgagttgcagcaacttagtcgctacgagaaggtgcggccg
cgacactgcgccggcacctcttactgcgtaccactcgcccatcacggtggtggtggcagc
ggcgttggcggtggcagtggcttttcagaggtatacgccggcgactccagtgctgagtca
gggccgggatcgctttcgccgcggactcaccatgagcacagctag
DBGET
integrated database retrieval system
