Choristoneura fumiferana (eastern spruce budworm): 141432836
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Entry
141432836 CDS
T11020
Symbol
spas
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfum04131
]
141432836 (spas)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cfum04812
]
141432836 (spas)
Enzymes [BR:
cfum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
141432836 (spas)
Membrane trafficking [BR:
cfum04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
141432836 (spas)
Cytoskeleton proteins [BR:
cfum04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
141432836 (spas)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_22
TIP49
AAA_5
AAA_16
Mg_chelatase
NPHP3_N
nSTAND3
IstB_IS21
AAA_19
Motif
Other DBs
NCBI-GeneID:
141432836
NCBI-ProteinID:
XP_073950727
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All DBs
Position
11:complement(13284685..13304768)
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AA seq
665 aa
AA seq
DB search
MVSGDDSNGRLSRKTTRSPNRKSKKADADLAKVSALRNDPPPSVHKRNLYVVSFPIIILF
NILRSLLYQLFIVFKYLYSASHRLMHKPNKNGEYNLEVVVKDGVVSTEIAGEMPYTHNVG
PGDPLLAKQKHHHRKAFEYISKALKIDEENEESQCCDDGQKELAIELYKKGIYELERGIA
VDCWGGRGDAWQRAQRLHDKMKTNLGMAKDRLHFLANLVALSKLGVEPERSENKPTESPL
KVRRPLEKSKTTLLAHTESNSGQTKATTEVAGRKLTTGGRRLPSGSGPLMKSQTLPRSMG
RSSSQPNSSNYTRHPVKPASTPPAVKRQLSSAYQVPASGSPVRRAAGTSRGTPTRSRTPQ
PLSVRGVDPKLVQLILDEIVEGGPKVHWDDIAGQEAAKQALQEMVVLPSLRPELFTGLRS
PAKGLLLFGPPGNGKTLLARCVAAECSATFFSISAATLTSKYVGDGEKMVRALFQVAREL
QPSIIFVDEVDSLLCERSSSEHEASRRLKTEFLVEFDGLPAAGADRLVVMAATNRPQELD
EAALRRFPKRVYVSLPDLRTRDSLLRRVLARGAAAAALAPDELARLAALTDGYSGSDLTA
LCRDAALQPIRELDPEEVRMLDLSLVRAITFQDFLDALKRIRPSVSPHSLAGYEKWSVQY
GDLGI
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggtttcgggtgacgattcaaatggtcgtttatcacgtaaaacaacgaggtctccgaac
cgaaagtctaagaaggctgatgcggacttagcgaaggtgtctgcgttgcgaaatgacccg
ccgccttctgtacacaaacggaacctttacgttgtttctttccccatcattatacttttt
aatattctaagatcactgctgtatcagttgtttatagtgtttaagtatttgtactcagcg
tcgcatcgtttaatgcacaaacccaataagaatggtgaatataacctagaggttgtagtg
aaagacggtgtggtgtcgacggagatagctggcgagatgccttacacacacaatgtgggc
cccggggacccactgcttgccaagcagaagcatcaccatcggaaagcttttgagtatatt
tcaaaagctttgaagattgatgaagaaaatgaagaaagtcagtgttgtgatgatggccaa
aaagagctagcaatagagctctacaaaaaaggcatctatgagttagaacgaggcatcgca
gttgactgctggggtggccgtggggatgcatggcagcgagcccagcggctccatgacaaa
atgaagaccaacctgggcatggccaaagatcgtctacactttcttgccaacctagtcgcc
ctcagtaagttgggggttgaaccagagaggagcgagaataagccaacggagtcccctcta
aaggtgcgcaggcccttagagaaatccaagaccacgttgctcgcccatactgaaagtaac
agtggtcaaacgaaggcaacaaccgaagtggccggtcgtaaactgacgacgggcgggcgg
cggctgccgagcggctccggcccgctgatgaagtcgcagacgctgccgcggtccatgggt
cgctcgtcctcgcagcccaacagctccaactacacgcggcaccccgtcaagccggcgtcc
acgcctcccgccgtcaagagacaactgtcgagcgcgtaccaggtcccggcgagcgggtcg
ccggtgcggcgcgcggccggtaccagccgcgggacgccgacgcgcagccgcaccccgcag
ccgctgagcgtgcgcggcgtcgatcccaagctggtccagctcatactggacgagatcgtc
gagggcggaccgaaggtgcactgggatgacatcgccggacaagaggcggctaagcaagcg
ttgcaagagatggtggtccttccgtcgctaaggccggaactgttcacggggctccggtcg
ccggctaaaggattgttgctgtttggaccaccagggaatggcaaaacgctgctagcccgc
tgcgtggccgccgagtgttccgccacgttcttctccatctcagcggccacgctcaccagc
aagtacgtcggcgacggcgagaagatggtgcgcgcgctgttccaagtcgccagggagctg
cagccgtccataatattcgtggacgaggtggactcgttgctctgcgagcgttcgtcgagc
gagcacgaggcgtcgcggcgcctcaagaccgagttcctggtcgagttcgacgggctgccg
gccgccggcgccgacagactcgtggttatggctgcgaccaatcggccacaggagctagat
gaagctgcgctcagacgtttcccgaagcgcgtgtacgtgtcgctgccggacctgcgcacg
cgcgactctctgctgcggcgcgtgctggcgcgcggcgcggcggcggcggcgctggcgccc
gacgagctggcgcggctcgcggcgctcaccgacgggtactcgggcagcgacctcaccgcg
ctgtgccgcgacgccgcgctgcagcccatacgagagctggacccagaggaagtgcgtatg
ctggacctgtcgctggtgcgcgcgatcaccttccaagacttcctggatgcactcaagcgc
atccggccgtccgtgtcgccgcacagtctcgctgggtacgagaagtggtccgtccagtac
ggagacctgggtatctga
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