Choristoneura fumiferana (eastern spruce budworm): 141432852
Help
Entry
141432852 CDS
T11020
Symbol
Rox8
Name
(RefSeq) TIA1 cytotoxic granule associated RNA binding protein Rox8
KO
K13201
nucleolysin TIA-1/TIAR
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfum03019
]
141432852 (Rox8)
03041 Spliceosome [BR:
cfum03041
]
141432852 (Rox8)
Messenger RNA biogenesis [BR:
cfum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
141432852 (Rox8)
Spliceosome [BR:
cfum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
141432852 (Rox8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_7
RRM_3
RRM_Nup35
Calcipressin
Motif
Other DBs
NCBI-GeneID:
141432852
NCBI-ProteinID:
XP_073950752
LinkDB
All DBs
Position
11:complement(14093531..14107736)
Genome browser
AA seq
395 aa
AA seq
DB search
MGDESHPKTLYVGNLDASVTEDFLCALFGQIGEVKGCKIIREPGNDPYAFLEFTNHSAAA
TALAAMNKRVFLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILREAFAPFG
EISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPANR
PSEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNVITEELMQNTFSQYGQIQDIRV
FRDKGYAFIRFTTKEAAAHAIEGTHNTEISGHAVKCFWGKENGGTGESQSTPSTTAAPPA
MGAQTQYPYPYQQGMGYWYAQGYPAIQGYMAPGYYQQYATAYSNQQAAAAGYRMGMPGGV
GGVGGAGAGAGAWGGAPQPLMYTTAMPSAPPYPSQ
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacgaaagccacccgaaaactctctacgtcggtaatttagacgcgagtgtcaca
gaagattttctatgcgcgttgttcggccaaataggcgaggtaaaaggttgtaagataatt
cgcgagccaggcaacgatccctatgcctttctcgagttcacgaatcactcggcggcggcc
acggccctggccgccatgaacaagcgggtgtttctggataaagaaatgaaggttaactgg
gctacgagtcctggaaaccagcccaagacggacacgagcaaccaccatcatatatttgtt
ggtgacctgtcacccgagattgagactcacatactgcgcgaggctttcgcgccgttcggc
gaaatctcgaactgtcgaatagttcgcgacccacaaacgctcaaatctaaagggtacgcg
tttgtttcattcgtgaagaaggcagatgcagaggctgcgattcaggctatgaatggacag
tggttaggatcacggtccatacgcacgaactggtcgacacgcaagccgccggctaacagg
cccagtgagggcgccccaagcagcaaacgagcgaagcagcccacatttgacgaagtctac
aaccagagctcaccgactaacaccacagtgtactgtggagggttcaccagtaatgtgatc
actgaagaattgatgcagaatacgttctcacagtatggccagattcaggatattagagta
ttccgtgataaaggttatgcattcattaggtttacgactaaagaagcggcagcacatgct
attgaaggcacacacaatacagagattagtgggcatgcagtaaaatgtttctgggggaaa
gagaacggaggcacaggagaaagccagagtacaccaagcaccacagcagcccctcctgcc
atgggtgcccagacacagtacccctacccctaccagcaaggcatgggatattggtatgcc
cagggctacccggcgatacaggggtacatggctccgggctactaccagcaatacgctacc
gcctacagtaaccagcaggctgctgcagcaggataccgcatgggcatgccaggcggcgta
ggcggcgtgggcggcgcgggtgcgggagcgggcgcgtggggcggcgccccgcagccgctc
atgtacacgaccgccatgccctccgctcccccctacccatcgcagtaa
DBGET
integrated database retrieval system
