Choristoneura fumiferana (eastern spruce budworm): 141433001
Help
Entry
141433001 CDS
T11020
Name
(RefSeq) uncharacterized protein
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_A17
DUF5641
DUF1759
Integrase_H2C2
RVT_1
rve
zf-H2C2
DUF1758
Peptidase_S8
Asp_protease_2
Peptidase_A2B
DUF7637
Motif
Other DBs
NCBI-GeneID:
141433001
NCBI-ProteinID:
XP_073950941
LinkDB
All DBs
Position
11:11086020..11091260
Genome browser
AA seq
1516 aa
AA seq
DB search
MEAKINVQLDVSSRINKAYVNYKKSPKDRITVPYVDARLEALEKLWQQFSSMHEKLVAES
SQTELEKSVYVTQAIYDATDECYLDYKCELKTTLSTLTPLPSSESSPQSSSSTSKTMQVR
LPKITIPVFSGQYSEWISFRDLFVSLIHDNADIDDVQKMHYLKGHLRGEAEQLLRHIPIT
NSSYQQCSHPSVENHGTPLAGHVCKVSNQEAGPSTATSINNHFVKGVAHQVLLATALVKA
ESQNKGEYQLLRALIDQGSQASFITRASVQLLGLKTTAAKGVISGLGGEQNLITRSMVEV
LITSRLNPGCVLRVSAYVLDKLTSYLPSAVASITSWPELEQLKLADPEYHTSNKIDILLG
AEVYSTIIENGIIKCPSGSLVAQNTTLGWILSGQLRSNEDISCNVVNMHTQVDQLLRSFW
EIEAEPCNKEKILSVEEQRCEDFYESTTTRDDHGRYIVRLPFRDQNPACADGHSKKIATK
RFSFLERKLERDQHLKQRYKEVLDEYLNLDHMIQINHSEGEQATKYTYLPHHAVIREDKE
TTKVRIVFDASCKGTNGVSLNDDLMVGPTLQPELRHIIMRWRTYPICFIADIVKMYRQIK
VNDEDSEYQRILWRDNPDQEIKEYKLLRVTFGTSAAPYLAVKSLIQVAKDEGKDFPLAAE
RVKNEFYMDDLMSGCEKEEEAVEIYKQMTELLRRGGFELQKWASNSQALLEQIRDANSRK
EEDKRIEVKQESVNKILGLTWSRSLDEFVYAVQLPPTTGPVTKRKVISDISKLYDPQGWI
APSIIKAKIFIQKLWLAGIDWDDELPPPLLEEWTEYRENLSELTKFRLKRWVWCSSDATL
VELHGFCDASNSAYAAVVYIRVIDAEGKVHVSLITAKTRVAPIKQISIPRLELSGAVLLA
KLLDEVSKVLKVPKSNLHAWTDSEVVLAWLSSHPSRWKTFVGNRVSEILSVTCRSQWSHV
RSEHNPADCASRGIKPSEFVTYDLWVRGPSWLQDKVICYKSFTKPLDTNLETRSIKTHLA
DVVEDQSSDEDVWSKFSSLTKLLRVAAYCRRILKRQNHTYLLKEEIEDALVIMIRKCQGE
AFREEISNIKLGKNISKKSILTSLSPQLDDSDLLRVGGRLHFAEIDNDARHPIILPKQSF
LTELIIRDAHKKSLHGGVQLMLNLLRSKYWIIGLKNLVKQQIRKCVICTRYATANKNQLM
GQLPSPRVTMSRAFQRSGVDYAGPINIRVSKGRGNRAYKGYICLFVCMATRGVHLEVVSD
LTAQGFLAAFKRFVARRGHCSDLYSDNGSNFVGAAKELLNLFNDERSRFLPEIADWLATN
GTQWHFIPPHAPNFGGLWEAGIKSCKYHLKRIIGNSTLTFEEMTTVLAQIESCLNSRPMC
YIQDQGDPMPLTPGHFIIGEPLLVAPDRNYEQSAVGSLRRWQFCQRMLQDFWRRWSQEYL
TRYMQRYKWSRVIPEPNIGDVVLVKELDLPPARWLLGQIVEKHPGLDNITRVVTLRYKGS
LIKRPVSKLCVLPVSD
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaaagattaatgttcagttggatgtttctagtcgtattaacaaggcttatgtc
aactataagaaatcaccgaaggatcgtattactgtaccgtatgttgatgcgcgtttagag
gctttagaaaagttatggcagcagttttcgtcgatgcatgaaaagttagttgcagaatct
tcacagactgagttggaaaaatctgtgtatgtcacccaggcgatttacgacgcaactgac
gagtgttacctcgattacaaatgcgaacttaaaacgacattaagtactttaacaccactg
ccatcaagcgaaagttcacctcaatcatcgtcatcaacgagtaaaactatgcaagttaga
ctgccaaagatcaccatccctgtgttttcggggcaatattcggaatggattagtttcagg
gacctgtttgtgtctcttattcacgataacgcagacatagatgatgtgcaaaagatgcac
tatcttaagggacacctcagaggcgaagcggagcaactactgcgtcatattcctattact
aacagcagttaccagcaatgttcacatccatcagttgagaatcacggaacaccactagca
gggcatgtgtgcaaagtatcaaaccaggaggcggggccatcaacggccacgagcatcaat
aatcattttgtgaaaggagtagcacatcaggtgctgctagccacagcgttagttaaagct
gagtcacaaaataagggagaatatcagctcttaagagctctcattgatcaagggtctcaa
gcatcatttatcacaagagcttcagttcagttgcttggactaaaaacaacagcggccaag
ggagttatatcaggattgggtggtgaacagaaccttatcacaaggtccatggtagaagtt
ttaatcacttcacgcctcaatcctggctgcgtgttgcgagtttcagcgtacgttcttgac
aaacttacttcatacttaccatcggctgtagcatcaatcacatcatggccggagctggaa
cagcttaaactggcagatccggaataccatacttctaataagatagacatcttattgggg
gcggaggtctacagcaccattatagaaaatggaataatcaaatgtccctcagggtcccta
gtagcacaaaacaccaccctgggatggatattaagtgggcaactaaggtcaaatgaagat
atatcctgtaacgtcgtaaacatgcatactcaagtagatcagctacttagatctttctgg
gaaatagaagccgaaccctgcaacaaagaaaaaattctgtcagtcgaagagcaaagatgt
gaagacttctatgaatccacaaccacgcgggacgatcatgggcgatatattgtaaggctc
ccgtttagggatcaaaatccagcctgtgcggatggccattcaaagaaaatcgcaacgaag
aggtttagctttctggaacggaagctggagcgggatcagcacctgaaacaaagatacaaa
gaagtgttagatgagtacctaaatctggatcatatgatacaaataaatcacagcgaaggt
gaacaagcaacgaagtatacgtatttaccacaccatgctgtaatacgagaagataaagag
actactaaagtaaggattgtgtttgatgcttcgtgcaagggtacgaatggcgtgtcattg
aatgacgatttaatggtgggaccaactctgcaaccagagttgcgtcatataataatgcgt
tggcgaacatatcctatttgttttatagcggacatagttaaaatgtaccgtcaaataaag
gtgaatgatgaagactcagagtatcagcgcattctatggcgtgacaatccagaccaagag
ataaaagaatacaagttactcagagtaacttttggaacatcagcagctccatatctggca
gtcaaaagcttgattcaggtagcaaaggacgaaggaaaggactttcctttggctgctgaa
agggtcaagaatgagttttatatggatgacctaatgtctggatgtgagaaagaagaagaa
gcagttgaaatttacaaacaaatgacagagttattaagaagaggtggatttgaattgcaa
aagtgggcaagcaatagtcaagcgttattggaacaaatacgggatgcaaattcaagaaag
gaggaggataaaaggatagaggtcaagcaagagtcagtaaataaaatattgggacttacc
tggagtagaagcctcgatgaatttgtatatgcagttcagctgccaccgacgaccggacct
gtaacaaaaaggaaagttatttcggatatatccaagctgtacgatccacaagggtggata
gcaccgagcataatcaaagcaaaaatattcatacagaagctatggttggcaggcattgat
tgggatgatgagttacctccaccgttgcttgaagaatggaccgaatatcgtgaaaaccta
tcagaacttaccaaatttagattgaaacgttgggtgtggtgtagctctgacgcaacgtta
gtggaactgcatggcttctgcgatgcgtcaaattcagcttatgcggcagtcgtatacatt
cgagtgatagacgctgagggaaaggtacatgttagtttgatcacagccaaaacgcgagta
gcgccgattaaacaaatatcaattcctcgattggaattatctggtgcagttctgctggca
aaactactcgacgaagtgtcaaaagtattgaaggtaccaaaatcaaacttacatgcttgg
accgactctgaagtagtgctggcatggttgagcagccatcctagtcgatggaagacattc
gttggaaacagagtctcggagattctatcagtgacttgtcgtagtcagtggtcacacgta
cggtcagaacacaaccctgcggattgtgcttcacgggggattaagccttcagaatttgtg
acctatgatttatgggtaagaggaccatcatggctacaagataaagtaatttgttacaag
agtttcacaaagccattagacaccaatttggaaaccagatcaattaaaactcacctggct
gacgtagttgaggatcagtcgagtgacgaggacgtctggtcgaagttttcgtcgctcacg
aagttgctgagagttgcagcttattgtagaagaatcctgaaaagacaaaaccatacttac
ctcctgaaagaagaaatagaagatgcgttagtgattatgattagaaaatgtcaaggagaa
gcgtttagagaggaaattagcaatatcaaactaggtaaaaatataagcaaaaaaagtata
ctcacttcactgagtcctcagctagacgactcagacttactccgagttggtgggcggttg
catttcgcagaaattgacaacgacgcaaggcatccaatcatattgccaaaacaatcattc
ctaacggaactcataattcgagatgcacataaaaagtcattacacgggggagtgcagttg
atgcttaatttgctgcggtcgaaatattggattatagggctaaaaaacttagtgaaacag
caaattaggaaatgtgtcatttgcacaagatacgcaactgcaaataaaaatcagttgatg
ggacaactaccatcgccgagagtgaccatgagtcgagcatttcaacgtagcggtgtagac
tacgcagggcccattaacataagggtttcaaagggtcgcggcaatcgggcatacaaaggg
tacatatgcttgtttgtttgtatggccacacgtggagttcatttggaggtcgtgagtgac
ctgacggctcagggatttttagcagcttttaagcggtttgttgcacgtcgcggtcattgt
agcgatttatacagtgacaatggtagtaattttgtgggagcagccaaggagttgctaaac
ttatttaatgacgaaagatcaaggtttttgccagaaatagctgattggctagccacgaac
ggcacccagtggcactttataccaccccacgcgccaaattttggtggtttgtgggaagct
ggcattaaatcctgcaaatatcatttgaaaagaatcatcggcaattcaacactgacattt
gaggagatgacgacagttttggctcaaattgaaagttgtctgaattcacgaccaatgtgt
tacatacaggaccaaggggatccaatgcctctaactccaggccatttcattataggggaa
cccttgctagttgcgcctgatcgtaactatgagcagtcagcggttggttcgttaagacgg
tggcaattctgccaacgtatgctacaagacttttggcggcgttggtcgcaagaatatttg
acacggtacatgcaaaggtacaagtggtcgcgtgttattcctgaaccaaatattggagat
gtggtgcttgttaaagaactggatttacccccagctaggtggctgttaggccagattgta
gaaaagcatccagggttggacaatattacgcgagttgtgacgttgcgttacaaaggctct
ttaataaagcgaccagtgtcaaaactttgtgtattacctgtctcagattag
DBGET
integrated database retrieval system
