Choristoneura fumiferana (eastern spruce budworm): 141433200
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Entry
141433200 CDS
T11020
Name
(RefSeq) LOW QUALITY PROTEIN: afadin-like
KO
K05702
afadin
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
141433200
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RA
PDZ
DIL
FHA
RA_2
PDZ_6
RA_3
PDZ_2
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
141433200
NCBI-ProteinID:
XP_073951228
LinkDB
All DBs
Position
12:7231812..7355145
Genome browser
AA seq
1869 aa
AA seq
DB search
MDAADKRMLEREALRNMIQQWNANRLDLFELSEPNENLEFHGVMRFYFQDSGQKIATKCI
RVASDATVSDVIETLIEKFRPDMRMLSLGSYSLWETHGPDDERRLEPHEKPLLVQLNWHA
DDREGRFLLKCSTNSDVSLSTVNEKGDQNFKRKLSKREKKELKKKEKLSRLKSDTNNENR
PVAEKLYTELPETSFTRSISNPEAVMRRRRQQKLERKLQQFRSKDGGPDTGGTLKIYGSS
LSPDVPYKTLLLSVGDTAAGVVREMLDKYGLSRHDPHHFCIVQVDTADNSESILEDDECP
LAIVMTHPHRSSIMFHVRRRPADSQPRRRKKKTTGVGAGCGAGGSSARPGCEPMLVEVAP
DGSPLENGRRVRITGDLLEVGSGNGSALQLYGPSIQPRHCLVAAGEAGGFTATPLHADAQ
VYVNGRRAVAPHSLPLQHGCLLKFGRVSTFRFMDPNQENLLNRNLSQSQHFGSGSIYDRS
GSALAEGEEGRATSPARGGSPASPASPAGPDDPYQYRDANDTLTPYNNNTLKLDNDSVLS
HASRDDYLRDDHASHRNNNSNYKDNYETTFDLDGNVETKSICSAKSGGSGHDNRMSATVG
SAARPGQEAILPAVLEFPEAGQAQFLAAVITRLDPHAPAFKLAPVYTLYLCARYRASTHY
RPELTPTERAHKLTAFLHHVATLIHATVQERCTDSAAQAFWMANASELLHFLKCDRHISS
FSTQAQELLPATVQNAFSNLVSCFQEELSRALGTLTSPALSDATEATAPTLQALAAAMVL
LRRCRVNAALTIQLFSHLFHYINAVCFNKLVTEPGTVSARWGAALAARLALLPRXGERQG
LELPADCHLARTHQAARLISGTYRTGAEARAALAACFKLNSVQVRALLTPLAPPDVVDAA
AAHATALADELCKADGREITLEESCWLGVGLLIPXDGFSAEVVRGVPPGLAEFVAPLQRG
GLCRLAHQPLARGVWTVYMAGYGAAARRPPDPAVHIIQLNKNSNGMGLSIVAAKGAGQSK
LGIYIKSVVAGGAAAADGRLAAGDQLLSVDGQSLVGITQEKAAEYLVRTGPTVTLEVXKQ
GAVLHGLATLLHQPAYNQKPAGEGAAGAGAIRRASERDLPARLAAEPVKPSKSTPALHHD
LHDAPPPPPPHGVSMHSGSASVANVAAASAAGAGAAAWAGRSRSSHNLNAAPHDGFYQNL
PAHEHALQDRWSSLRSSTGSNRPQSAHYAPAPLDAPASPASPASPAPPQHHPNQQNAMAR
SAKLAEMSEEVTRRQHMQYQLAQKAATLPPHASHPGLASPAHYQHPPHPPHPPMSPTMHL
NMHHQQNMHQAMHVNNMQQGMPQNIQGNMQAMQQNMHQMHQHMHAPPMSPPQPYPHAGQP
QRYEWHPPGPPSPQRAQPPVAPKPQGVRRSESELEEQYQQQTQPQSTMIQPDDERYVASA
MEPLAVSPYGGASRAVAGAGAVAGAGPNAAGAQNPWQREERERQAEARRAHARSRRDAAI
AALVALGAARSPAQSQQLRALQLERDFERRASHHKQEDNANMETGVDDDSPSPPPEPGRP
QHETGRPQYEPNRHQYESSRAQHEPGRLQQEPGRPQLEPGRPQHEQGRPQYEPGRPQYDP
GRPQYEPGRPQHEPGRPQQDPGRPPPDACRAPPPPKSILKTNTPRPEVTNGYAQDMAGGE
ESVSEAAAGVAALSVAPPPPPPERGSSFAVMATRARALSPPDHTPTPHSPPGQGRDKRVS
FHERAQAAPAPAPAAAPPAPPASSPPPLDPPANEDPDRFLEEAESMLGASPAAAPTHTPG
VIGAQEVYRDPRARRLAEKQQAAASAAPVPEHLSFKDKMKMFALEAGDPNTPKDKVKISR
AQRDIDAVH
NT seq
5610 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggcggataagcgcatgctggagcgcgaggcgctccgcaatatgatccaacag
tggaacgccaaccgcctcgacctgttcgagctcagtgaacccaacgagaacttggagttc
catggagtcatgcggttctattttcaagactccgggcaaaagatagcgacgaaatgcatt
cgcgtcgcttccgacgccaccgtcagtgatgtcatagagacgctgatcgagaaattccgt
ccggacatgcgcatgctctcgctgggctcgtactcgctgtgggagacgcacgggccggac
gacgagcgccggctggagccgcacgagaagccgctgctggtgcagctcaactggcacgcg
gacgaccgcgagggacggttcctgctcaagtgctccaccaactcggacgtttccctgtcg
acggtcaatgagaaaggtgaccagaatttcaagcggaaactgtcgaaacgcgaaaagaaa
gaactgaagaaaaaagaaaaactatcccgactcaaatcggatacgaacaacgaaaacaga
cctgttgctgaaaaactttacacagaactgccggagacatctttcacgcgcagtattagc
aacccggaggcggtgatgcgccgccgccgccagcagaagctcgagcgcaagctgcagcaa
ttccgctcgaaagacggcggccccgacacaggtggcaccctgaagatatacggttcgtcg
ctgtcgccggacgtgccgtataagacgttgctcctctctgtgggcgacacggcggccggc
gtcgtgcgcgagatgctcgacaagtacggcctgtcgcgccacgacccgcaccacttttgc
atcgtccaggtggatacagcggacaactccgagagcatactcgaggacgacgagtgcccg
ctcgccatcgtcatgacacacccacatcgcagctccatcatgtttcacgtgcggcggcgg
ccggcggactcgcagccgcggcggcgcaagaagaagacgacgggcgtaggcgcgggctgc
ggcgccggcggcagcagcgcgcggcccggctgcgagcccatgctggtcgaggtcgcgccc
gacggctcgccgctcgagaacggccgtcgcgtgcgcatcactggcgacctgctcgaggtt
gggtcagggaacgggtcggcgctacagctgtacgggccgtcgattcaaccgcggcactgc
ctggtggcggcgggcgaggccggaggcttcaccgccacgccgctgcatgctgacgcccaa
gtctacgtcaacggccgtcgcgctgtcgcaccgcactcgctcccgttgcagcacgggtgc
ctgctcaagttcgggcgcgtgtcgacgttccgcttcatggacccgaaccaggagaacctc
ctcaacaggaacctgtcgcagtcgcagcacttcggctccggctccatctacgacaggtcg
ggctcggcgctggcggagggcgaggagggccgcgcgacgagccccgcgcgcggcggcagc
cccgccagccccgccagccccgccggtcccgacgacccctaccagtaccgcgacgccaac
gacacgctcacgccctacaacaacaacacgctcaaactcgacaacgactccgtgctctcg
cacgcctccagggatgactacctgcgcgacgatcacgcgtcgcaccggaacaacaactcc
aactataaggacaattatgagaccaccttcgacctagacggcaacgtcgagaccaaaagc
atttgcagcgccaagagcggcggctccggccacgacaacaggatgagcgcgacggtgggc
agcgcggcgcggccgggccaggaggcgatcctgccggccgtgctagagttccccgaggcg
gggcaggcgcagttcctcgccgctgtcatcacgcgcctcgacccgcacgcgcccgccttc
aaactggcgcccgtctacacgctctatctctgcgccaggtaccgcgcgtcaacgcactac
cggcccgagctgacgccgacggagcgtgctcacaaactgaccgctttcctacatcacgtc
gccacgctcatacacgccactgtgcaggagcggtgtacagactcagccgcccaagcattc
tggatggcgaacgctagcgaactactacacttccttaaatgcgaccgacacatctcgtcc
ttctccacgcaagcacaagagttgctgccggcgacggtacaaaacgcgttcagcaacctg
gtgtcgtgttttcaagaggaactgtcccgcgcgctgggcacgctgacgagcccggcgctg
agcgacgcgacggaggcgacggcgcccacgctgcaggcgctggccgccgccatggtgctg
ctgcgccgctgccgcgtcaacgccgcgctcaccatacagctgttctcgcatctcttccat
tacatcaacgccgtctgcttcaacaagttggtgacggagccgggcacggtgtcggcgagg
tggggcgcggcgctggcggcccggctggcgctgctgccgcgtnngggcgagcgccagggg
ctggagttgcccgcagactgccatctggcgcgcacgcatcaggccgcgcggctgatcagc
ggcacgtaccgcacgggcgcggaggcgcgcgcggcgctggcggcctgcttcaagctgaac
tcggtgcaggtgcgcgcgctgctcacgccgctggcgccgcccgacgtcgtcgacgccgcc
gccgcgcacgccaccgcgctcgccgacgagctctgcaaggccgacggacgggagataacg
ttagaggagagctgttggctcggcgtgggcctgctgatcccgngggacgggttcagcgcg
gaggtggtccgcggcgtgccgcccgggctggcggagttcgtggcgccgctgcagcgcggc
gggctgtgccgcctggcgcaccagccgctggcgcgcggcgtgtggaccgtgtacatggcg
ggctacggcgccgccgcgcgccgcccgcccgaccccgccgtccacatcatacagctcaac
aagaactccaacggcatggggctcagcatcgtcgccgccaagggcgcgggacagagcaag
ctcggaatctacataaagtctgtggtggcgggcggcgcggcggcggcggacgggcggctc
gcggccggcgaccagctgctctccgtcgacggacagtcgctcgtcggcatcacccaggaa
aaggcggcggaataccttgtgcggacgggccccacggtgacgctggaggtgngcaaacag
ggcgccgtgctgcacggcttggcaacgttgctgcaccaacctgcctacaaccaaaaacca
gcgggcgagggcgcggcgggtgctggcgcgatacggcgcgcgtcggagcgcgacctgccg
gcgcgactggcggccgagcccgtcaagcccagcaagagcacgcccgcgctgcaccacgac
ctgcacgacgcgccgccgccgccgccgccccacggcgtgagcatgcattccggcagcgcg
agcgtggccaacgtggcggcggcgagcgcggcgggcgcgggcgcggcggcgtgggcgggc
cgctcgcgcagcagccacaacctaaacgccgcgccgcacgacggcttctaccagaacctg
cccgcgcatgaacacgcgctccaagaccggtggtcgtcgttacgcagctccacgggcagc
aaccggccgcagtcggcgcactacgcgcccgcgccgctcgacgcgcccgcctcgcccgcg
tcgcccgcgtcacccgccccgccgcaacaccacccgaaccaacaaaacgctatggcccgt
tcagcaaaactagcggagatgtccgaagaggtcacgcggcgacaacacatgcagtaccag
ctggcccagaaggcggccactctcccaccgcacgcctcgcaccccggcctcgccagcccc
gcgcactaccagcacccgccgcacccgccgcacccgcccatgtcgcccaccatgcatctc
aacatgcatcaccaacagaacatgcaccaagctatgcatgtcaataatatgcagcaaggc
atgccgcagaacatacaagggaatatgcaggcgatgcagcagaacatgcaccagatgcac
caacacatgcacgcgccgccgatgagcccgccgcagccctacccgcacgccggccagccg
caaaggtacgaatggcacccaccggggccgccgtcgccgcaacgcgcgcagccgcctgtc
gctcctaaaccgcagggcgtgagacggtccgaatccgagcttgaagaacaataccaacaa
caaacccagccacaatccacgatgatacagcccgatgatgagcgttacgtggcgagtgcc
atggagccgctagcggtgtcgccgtacgggggcgcatctcgcgcagtagcgggggcaggc
gcggtggcgggagcggggccgaacgcggccggcgcacaaaacccgtggcagcgagaggag
cgcgagcgacaagctgaagcgagacgagcccacgccagaagccgcagggacgcagcgatc
gcggcgctggtggcgctgggcgcggcgcgctcgccagcgcagagccagcagctgcgcgcg
ctgcagctggagcgggacttcgagcggcgcgcctcgcaccacaaacaggaggataatgcc
aacatggagactggagtggacgatgacagtccgtcgcccccgcccgagccgggccggccg
cagcacgagactggtcggccgcagtacgaaccaaatcgccatcaatacgagtcgagtcgg
gcacagcatgaacccggtcgattgcagcaagaaccgggccgaccacaacttgaaccgggt
cggcctcaacatgaacagggccggccacaatacgaaccgggccggccgcagtatgatcca
ggccggccacaatacgaaccgggccggccacaacatgaaccgggccgaccacaacaagat
ccaggccggccgccgcccgacgcgtgccgcgcgccaccgccgcccaagtcaatcctcaag
accaatacacctcgccctgaagtcaccaacggatacgcgcaagatatggcgggaggcgag
gagagcgtgtcggaggcggcggcgggcgtggcggcgctgagcgtggcgccgccgccgccg
ccgcccgagcgcggctcctccttcgccgtcatggccacgcgcgcgcgcgcgctctcgccg
cccgaccacacccccacgccgcactcgccgccagggcagggtcgtgacaagcgcgtttcg
ttccacgagcgcgcgcaggccgcgcccgcgcctgcgcccgccgccgcgccgcccgcgccg
cccgccagctcgccgccaccgctcgacccgcccgccaacgaggaccctgaccggttcctg
gaggaagcggagagcatgctgggggcgtcgccggccgccgcgcccacgcacacgcccggc
gtcatcggcgcgcaggaggtttaccgggacccgcgcgcgcgccggctggccgagaagcag
caggcggctgcgagcgccgcgcccgtgcccgagcacctctccttcaaggacaagatgaag
atgttcgcgctcgaggccggcgaccccaacacgcccaaggataaggtgaagatatcgcgc
gcgcagcgagacatcgacgcagtgcactga
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