Choristoneura fumiferana (eastern spruce budworm): 141433215
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Entry
141433215 CDS
T11020
Symbol
elgi
Name
(RefSeq) E3 ubiquitin-protein ligase NRDP1 elgi
KO
K11981
E3 ubiquitin-protein ligase NRDP1 [EC:
2.3.2.27
]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141433215 (elgi)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfum04131
]
141433215 (elgi)
04121 Ubiquitin system [BR:
cfum04121
]
141433215 (elgi)
03029 Mitochondrial biogenesis [BR:
cfum03029
]
141433215 (elgi)
Enzymes [BR:
cfum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141433215 (elgi)
Membrane trafficking [BR:
cfum04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
141433215 (elgi)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
141433215 (elgi)
Ubiquitin system [BR:
cfum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141433215 (elgi)
Mitochondrial biogenesis [BR:
cfum03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
141433215 (elgi)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP8_interact
zf-C3HC4
zf-C3HC4_2
U-box
zf-RING_2
zf-RING_UBOX
zf-Nse
zf-rbx1
zf-C3HC4_4
zf-C3HC4_3
zf-RING_10
zf-RING_6
zf-RING_5
zf-ANAPC11
Sina_ZnF
SlyX
Sec2p
Spc29
DUF4485
Motif
Other DBs
NCBI-GeneID:
141433215
NCBI-ProteinID:
XP_073951249
LinkDB
All DBs
Position
12:7650254..7657426
Genome browser
AA seq
315 aa
AA seq
DB search
MGFEIKRFQGDVDEELICPICSGVLEDPLQAPACEHAFCRACITEWISRQPTCPVDRQAV
TASQLRPVPRILRNLLSRLCTSCDNAPHGCNAVLKLDSLASHLVECEYNPKRPMPCEAGC
GLVIPKDELAEHNCVRELRALIATQQGKLTDFQQELAEQRLVINEHKRELALLKEFMRAM
RVSNPTMRVLADQMEREEVSRWAASLARARVTRWGGMISTPDDVLQMMIKRSLSESGCPP
HIIDDLMENCHERRWPPGLSSLETRQNNRRLYEKYVCKRVPGKQAVLVLQCDNTHVDEHM
MTEPGLVMIFAHGIE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggggtttgaaataaaaaggtttcaaggtgacgttgacgaggagctgatttgccctatt
tgctcaggagttctcgaggaccctttacaggcgccagcttgcgagcacgcgttttgtcgc
gcgtgtatcactgagtggatcagccgccagccaacttgcccagtggatcgccaggcagta
accgccagccagttgagaccagttccacgaatactacgtaacttactgtccagattgtgc
acaagttgtgataacgcgccacacggctgcaacgctgtgctgaaactggattccttggct
tcccatttagttgaatgtgagtacaacccaaagcgaccaatgccatgcgaggccggctgc
ggcctcgtgatcccgaaggacgagttggcggaacacaactgcgtgcgcgagctacgagcc
ctaatcgccacgcagcagggcaaactgaccgacttccagcaggagctggccgagcagagg
ctggtcataaatgagcataaacgcgagttggcgctactgaaggagttcatgcgagccatg
cgcgtatcgaacccgacgatgcgcgtcctggcggaccagatggagcgcgaggaggtgtcg
cgctgggcggcgtcgctcgcacgcgcgcgcgtcacgcgctggggcggcatgatctccacg
cccgacgacgtgctgcagatgatgataaagcggagtctatcggagtcgggctgcccgcca
cacatcatcgatgatctcatggagaattgccacgagcggcggtggccccccggcctgtcc
tcgctcgagactagacagaataatagaaggttatatgaaaagtacgtgtgcaaacgagtg
ccgggcaaacaggctgtgctggtcttacaatgtgacaacacgcatgtggacgaacatatg
atgacggagcccggactcgtcatgatattcgcccacggcatcgagtag
DBGET
integrated database retrieval system
