Choristoneura fumiferana (eastern spruce budworm): 141433216
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Entry
141433216 CDS
T11020
Symbol
PCNA
Name
(RefSeq) proliferating cell nuclear antigen
KO
K04802
proliferating cell nuclear antigen
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03030
DNA replication
cfum03410
Base excision repair
cfum03420
Nucleotide excision repair
cfum03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
141433216 (PCNA)
03410 Base excision repair
141433216 (PCNA)
03420 Nucleotide excision repair
141433216 (PCNA)
03430 Mismatch repair
141433216 (PCNA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfum03032
]
141433216 (PCNA)
03400 DNA repair and recombination proteins [BR:
cfum03400
]
141433216 (PCNA)
DNA replication proteins [BR:
cfum03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
141433216 (PCNA)
DNA repair and recombination proteins [BR:
cfum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
141433216 (PCNA)
MMR (mismatch excision repair)
Other MMR factors
141433216 (PCNA)
TLS (translesion DNA synthesis) factors
Other TLS factors
141433216 (PCNA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad1
Rad9
Hus1
Tipalpha
Motif
Other DBs
NCBI-GeneID:
141433216
NCBI-ProteinID:
XP_073951250
LinkDB
All DBs
Position
12:7662150..7667806
Genome browser
AA seq
260 aa
AA seq
DB search
MFEARLLKSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY
RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFVFESPNQEKVSDYEMKLMN
LDLEHLGIPETEYSCTIRLPSAEFARICRDLSQFGESMVISCTKEGVKFSSTGDIGSANI
KLAQTASVDKEEEAVVIEMDEPVTLTFACQYLNYFTKATSLSPQVQLSMSADVPLVVEYR
IHDIGHIRYYLAPKIEEEDS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaggcacgtttactcaagagttctatcctcaagaaggtgctcgaagccatcaaa
gatcttctgacacaagccacgtttgattgcgatgacaatggaatccaattacaggcaatg
gacaactcccatgtgtcactggtctcactcactctccgggcagatggcttcgacaaatac
agatgcgacagaaacatctccatgggcatgaatctagggagcatgtcaaaaatcctgaag
tgtgcgggcgacaaggacacagtgacaatgaaggcgcaggacaacgcagacaccgttaca
tttgtgttcgagagccccaaccaggagaaagtgtctgactatgaaatgaaactcatgaat
ttagaccttgaacatttaggtattcctgagaccgagtacagctgcacgattcgcctgccg
agtgcagagttcgcgagaatctgccgagatctgtcacaatttggagagtctatggtcata
tcttgcacaaaagagggagttaaattctcttcgactggcgacatcggttcagcaaacatc
aagcttgctcaaacagcctcagtggacaaggaggaggaagcagttgtcatcgagatggat
gaacctgtaacccttacatttgcctgccagtacctcaactacttcactaaggcgacgtca
ctcagcccccaggtccaactgtcgatgtcggcggatgtgcctctagtagtggagtatcgg
attcatgatatcggacacatccgctactacttggcgcccaagattgaggaggaagatagc
tag
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integrated database retrieval system