Choristoneura fumiferana (eastern spruce budworm): 141433489
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Entry
141433489 CDS
T11020
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141433489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfum03041
]
141433489
Spliceosome [BR:
cfum03041
]
Complex B
Other components
Prp19-related factors
141433489
Complex C
141433489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
Torus
zf_CCCH_4
zf-CCCH_4
zf-CCCH_2
zf-CCCH
zf-CCCH_PARP12
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
141433489
NCBI-ProteinID:
XP_073951642
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All DBs
Position
12:complement(15708762..15712683)
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AA seq
234 aa
AA seq
DB search
MAVSKTTNTYNRQRWEDSDFPILCQTCLGDNPYIRMHKEKYGKECKVCVRPFTIFRWCPG
SRMRFKKTEICQTCSRIKNVCQTCLLDLEYGLPIQVRDAALKIQDDMPRNEVNNKCYIQN
LDSQMSKFDSTQPSNSALKSKGGSNLLLKLARTAPYYKRNRSHVCSFWVKGECRRGEKCA
YRHEKPTARNDPLADQNIKDRYYGVNDPVAEKLLRQAAVTPALPAPEDRTVTTL
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtcgaaaaccacaaatacgtataatcgtcaaagatgggaagattcggatttc
ccaattttatgccaaacatgcctgggggacaatccatacattcgaatgcacaaagaaaag
tacggcaaggaatgtaaagtatgtgttcgtccattcactatctttcgctggtgcccaggc
tccagaatgcgcttcaagaaaacagagatttgtcagacatgttccaggataaaaaatgtt
tgtcaaacatgcttgttagatttggagtatggtctgccgatccaagtcagagatgcagcg
cttaaaatacaagatgatatgcctcgtaatgaagttaacaacaagtgttacattcagaac
ttagatagtcagatgtctaaatttgattctacccagccgagtaattctgcgctcaagtct
aaaggtggttcaaacttactattgaagttggcaaggaccgctccctattataaacggaac
cgatctcatgtgtgctcattctgggtgaaaggcgagtgtcggaggggagaaaagtgcgca
tatcggcatgagaaaccaactgcccgaaatgatcctctcgctgaccagaacattaaagac
agatactatggtgtaaatgaccccgtggctgagaagctgttgcgacaagctgcagtcacg
cctgcactgcctgcacctgaagacaggacagttactacactctaa
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