KEGG   Choristoneura fumiferana (eastern spruce budworm): 141433936
Entry
141433936         CDS       T11020                                 
Name
(RefSeq) uncharacterized protein
  KO
K19719  collagen type II alpha
Organism
cfum  Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum04512  ECM-receptor interaction
cfum04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:cfum00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    141433936
   04518 Integrin signaling
    141433936
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:cfum00536]
    141433936
Glycosaminoglycan binding proteins [BR:cfum00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   141433936
SSDB
Motif
Pfam: Collagen COLFI VWC VWC2L_2nd
Other DBs
NCBI-GeneID: 141433936
NCBI-ProteinID: XP_073952187
LinkDB
Position
13:5017826..5035753
AA seq 1500 aa
MWQTVVALLALLALQASCKELTEGALKEPEPKDELPQAQDPNNIDLDPGLSYDEYDGADL
AEQDFRGLGTANSGTRRPPQSANRVPSSPRCIDLGRAWSEGERWKRDNCTLCQCSGGRVN
CSMVDACRRTNPPTSRPAYGFGAQPSVSVRGAPGHPGDDGPSGLPGTTGASGIPGAPGIP
GPPGPMPDVNTYLAQLAASAGGDKGPAFDPYQYMQASVGTPGIRGIQGPQGPPGPQGFQG
PRGEPGEPGMPGQQGPPGERGPPGVPGKDGSPGDDGEPGPAGAVGQAGPRGAPGVPGIQG
LKGHRGFDGKDGAKGDQGPAGEKGPTGLPGQMGPAGPIGPVGPRGERGREGSPGSPGMRG
ADGANGPPGPVGNVGKPGAPGFPGNPGIKGEQGAVGPQGPQGLQGTRGDSGRPGLPGDVG
PPGLAGRDGTPGEKGAQGPHGNAGPQGFPGPRGIPGVAGDPGVHGAKGEPGQMGERGSRG
EQGIRGEAGAPGPRGLPGSVGPEGKRGKRGLRGPAGNIGPQGERGQIGMRGLPGADGPIG
ARGQPGERGNVGLPGEKGGTGDAGRPGPQGLQGPRGLVGRPGVSGKSGPPGERGIPGADG
RPGELGPQGLQGTPGPMGGPGERGLQGEPGKDGETGPQGVEGRKGDSGRDGNPGIQGPQG
PPGPSGDRGPTGAAGPTGFPGMPGAAGLPGAAGKEGEPGVAGPAGPPGQPGPRGERGFSG
ERGLPGSAGVAGEKGETGAQGPDGPPGPEGPRGSKGQTGQLGAMGLPGHRGLTGAPGDKG
ERGSVGPSGSDGPPGRQGEQGPQGPVGPAGPPGEPAERGEPGAPGLPGEAGAHGSPGERG
QPGLQGAQGLPGSPGLTGMPGLKGDRGYAGLKGQQGAPGSTGIAGEPGLRGLPGSAGAKG
ARGEHGAKGEAGHAGLPGRPGDMGAQGLQGSPGPTGIPGLAGPKGATGDSGRPGAPGPQG
LTGPQGPEGAKGERGSEGEAGPQGPSGPQGPAGERGPSGLPGMSGPPGPQGLRGTQGENG
TPGKPGADGTPGPAGSPGLQGPPGPMGEQGPEGRPGKLGQPGIPGRPGDRGLIGQPGVSG
PPGAPGLQGPPGQAGPSGPAGERGPRGETGPQGVDGPQGPAGKQGPAGLDGAKGERGEAG
ADGAKGHAGLPGLPGIAGAPGRQGERGLPGQMGNPGKDGEAGPRGLPGRDGAPGPQGPAG
PAGGRGPPGDTGRHGPPGQAGPPGPPGPPGEGFAYDSAAIAAMMQQGSVKGPDPLGDDPN
SFPARFFKEDMSDAERKEIVTKAYERLKFSLDKFLRPDGSKEAPAKTCGDIKYHHPGFES
GQYWIDPNGGDVKDAILVHCDMATGGSCIYPKPMESKDITYKGDEKEVWLSEMEDGFTIT
YKADHSQLNYLQLLSVRATQNVTFHCRNTVGYFDPATNNHRRGIKLLAYNDAEILPKANN
RLRYKVLLDECQYKQPEWAKTVVLFETEKSGRLPLLDVAVRDLGREKQQFRVELGLACFS
NT seq 4503 nt   +upstreamnt  +downstreamnt
atgtggcagaccgtagttgcgctcctcgcgctcctggcgctccaggcatcctgtaaggag
ctgactgagggagccctaaaggagcctgagcccaaagatgagctgcctcaggcgcaggac
cctaataacattgacctggaccccggcctctcgtacgatgaatacgacggagcagattta
gcagaacaagactttcgaggattaggaacggccaatagtggtacccgacgaccccctcag
tcggcaaatcgagtcccaagcagtcctcgctgcatcgacctgggccgcgcgtggtcggaa
ggcgagcggtggaagcgggacaactgcaccctctgccaatgctccggagggcgcgtcaac
tgctcgatggtcgacgcctgccgcagaaccaacccaccaacatctcgaccagcttacggc
ttcggtgctcagccttcagtttccgtgcgtggagcccccgggcaccctggtgacgacgga
cccagcggcttgcctgggacgacgggtgccagcggcatccctggggcacctggtattcct
ggcccccctggacctatgcctgatgtaaatacgtatttagctcaactagccgcaagcgct
gggggtgacaagggacctgccttcgacccgtaccagtacatgcaagcctcagtaggcact
ccaggaatcagaggaattcaaggaccgcaagggccaccaggacctcaaggttttcaagga
cctcgtggtgaaccaggagaacccgggatgccaggacaacagggtcccccgggagaacga
ggccctccaggagttcctggaaaagacggatctccgggtgatgatggtgagccaggccca
gcaggcgcagtgggccaggctgggccccgtggggcgccaggcgtgcccggtatccaaggc
ctaaaaggacacaggggcttcgacggcaaggacggcgcgaagggtgaccagggtcccgct
ggggagaagggccccactggacttccaggacaaatgggccctgctggacctattggccca
gtaggaccccgtggagagagaggtcgagaaggttctcccggctctcccggcatgcgcgga
gctgacggtgctaatggaccacctggacctgtgggaaacgttggtaaacctggcgcaccg
ggttttcctggtaaccctggcataaaaggcgaacaaggtgcagtgggaccacaaggcccc
cagggcctacaaggtactagaggcgattcaggccgcccagggttaccgggagatgtcggg
cccccaggactcgcaggcagagacggaactccgggagagaagggagcacagggcccacat
ggaaacgctggtccacaaggatttcctggaccaagaggcataccaggcgtagccggggat
cctggtgttcacggtgctaaaggagagccaggtcaaatgggagaaagaggctctagagga
gaacaaggaatacgaggcgaagcaggagctccgggcccacgtggtcttcctggaagcgtt
ggtcctgaaggaaaacgagggaagcgaggtctcagagggcctgctggtaacattgggcct
caaggagagaggggtcagataggaatgagaggattacccggtgctgacggtccgatcgga
gctagagggcagcccggtgaacggggaaatgttggcttacctggtgagaaaggcggtact
ggtgatgctggacgcccgggccctcagggtctgcaaggcccgaggggtttggtggggcgg
ccgggagtatcgggaaaatcgggccctcctggggaacgtggtataccaggggctgacggt
agacctggtgaacttggtccacaaggattgcaaggaacacctgggcctatgggtgggccg
ggagaacgaggattacaaggcgaaccaggtaaagacggagagacaggtccacagggggtc
gaaggccgaaaaggcgactcaggccgagatggtaaccccggtatccagggaccacaaggg
ccgccaggaccttctggggaccgtggacctactggtgcagctggaccgactggattccct
ggaatgcctggtgcagctggcttacctggtgctgctggaaaagagggcgaaccaggtgtt
gcgggtccggccgggcctccaggccaacctgggccgagaggcgagagaggtttcagcggt
gaaagaggcctgcctggttcagcgggcgtagctggcgaaaaaggcgagacaggggcacag
gggcctgatggtcctcctggtcctgaaggtcctagaggaagcaaagggcaaacaggtcaa
cttggagcaatgggtctaccgggacatagaggtctgacgggggctcctggagacaagggt
gaaaggggttccgttggtccctcgggcagcgacggacctccaggtcgtcaaggagaacag
ggtccccaaggcccagtgggtcctgccgggcctccgggcgagccagccgagcggggtgag
cctggcgcccctggtctccctggggaagccggcgcccatggctccccgggagagcgtggc
caaccagggctacagggagcgcagggcctgcccggctcgccaggcctaactggcatgccc
gggttgaaaggagacaggggttacgctggacttaaaggacaacaaggagcacctggcagt
actggcatagccggagagccaggcttgcgaggtctgccagggtcggcaggggcgaagggc
gcgcgaggggagcacggggccaagggtgaggctggacacgcgggactcccaggtcggccg
ggtgacatgggggcacagggacttcaaggcagcccagggccgacagggattccaggcttg
gcaggacctaaaggagcaacaggagattctggacgacccggggcaccaggacctcaggga
ctcacgggtcctcaaggacctgagggcgccaagggagaacgaggcagtgagggagaggca
ggacctcagggccccagcggacctcaaggccccgcaggagagagagggccaagtggattg
ccaggaatgagtggaccgcctggacctcaaggattacgtggaactcagggtgaaaatgga
accccaggcaaaccgggtgccgatggcaccccaggcccagcaggcagccctggactacaa
ggtcctcctggccccatgggcgaacaagggccagaaggacgcccaggaaaacttggacaa
cccggtatacctggaagacctggagacagggggctcatcggacagccgggtgtgtcggga
cctccaggagcaccgggcctacagggtccaccaggccaagctggaccttctggtccagcc
ggcgaacgtggacctcggggtgaaaccggtccccaaggagtggacggcccacaagggcca
gccggcaagcaaggacccgccggtcttgatggcgccaaaggagaacggggagaggcagga
gcagatggggccaaagggcacgcagggctgccagggttaccgggcatagctggcgcacct
ggaagacaaggagaaagagggttgcccggccaaatgggtaatccaggaaaggacggtgaa
gctggtccacgaggtttacctggccgcgacggtgctcctggccctcaaggccctgctggc
ccggcgggaggccgcgggccccccggcgacacgggccgccacggcccccctggacaggct
ggaccccccggcccacctggacctcctggtgaaggctttgcgtacgattctgccgctatt
gccgcgatgatgcaacaaggatcagtgaaaggccctgacccgctcggtgatgaccccaac
tcgttcccagctcgattcttcaaggaagacatgtcagatgcagagcgcaaagagatagtg
accaaggcttacgagagactgaagttttcgctcgacaaattcctacgacctgatggctcg
aaagaagcgcctgccaaaacctgtggggacatcaagtatcatcatcctggatttgaaagt
ggccagtactggatcgaccccaatggaggtgacgtgaaggacgctatcctagtccactgc
gacatggctaccggtggcagctgcatctaccccaagcccatggagtccaaggacatcacg
tacaagggtgatgagaaagaggtctggctgagcgagatggaagacggatttaccataacc
tacaaagcggaccacagccagctcaattacctgcagctcctttctgtgagggctacgcag
aatgtgaccttccactgccgcaataccgtgggctacttcgacccagccaccaacaaccac
cgacgcggcatcaagctgctggcgtacaacgacgcggaaatcctgccaaaggctaacaac
cgactaagatataaggtgctgttggatgagtgccagtacaagcaaccagagtgggctaaa
accgtagtcctgttcgagacagaaaagtccggtcgtctgccgctcctggatgtggcagtt
cgcgacttgggacgtgagaagcagcagttccgcgtggaactgggactcgcttgcttttcg
tag

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