Choristoneura fumiferana (eastern spruce budworm): 141433993
Help
Entry
141433993 CDS
T11020
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03018
RNA degradation
cfum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141433993
09123 Folding, sorting and degradation
03018 RNA degradation
141433993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfum03019
]
141433993
03041 Spliceosome [BR:
cfum03041
]
141433993
Messenger RNA biogenesis [BR:
cfum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
141433993
mRNA degradation factors
5'-3' decay
Lsm complex
141433993
Spliceosome [BR:
cfum03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
141433993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Gemin6
Motif
Other DBs
NCBI-GeneID:
141433993
NCBI-ProteinID:
XP_073952281
LinkDB
All DBs
Position
13:complement(8154984..8155449)
Genome browser
AA seq
96 aa
AA seq
DB search
MASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSSTGVAQVVLGLH
IIRGDNVAIVGQIDESIDSRLDLSNIKAEPLGVIAH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaggcctcgaaaattacgttaaccaaacagtgtctgttatcacatctgacgga
cgtaatttcatcggcacattgaaaggttttgatcaaacaataaacataatactagacgaa
tctcacgagagagtattttcctcttcgactggagtagcacaggtggtgctcggactacat
ataattcgaggcgacaacgttgctatcgtcggtcaaatagatgaatctatcgacagcaga
ttggacctgagtaacataaaagctgaaccactaggtgtaatagcgcattaa
DBGET
integrated database retrieval system
