Choristoneura fumiferana (eastern spruce budworm): 141434012
Help
Entry
141434012 CDS
T11020
Name
(RefSeq) RAD50-interacting protein 1-like
KO
K20474
RAD50-interacting protein 1
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfum04131
]
141434012
Membrane trafficking [BR:
cfum04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
141434012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
Motif
Other DBs
NCBI-GeneID:
141434012
NCBI-ProteinID:
XP_073952317
LinkDB
All DBs
Position
13:complement(9667258..9676816)
Genome browser
AA seq
634 aa
AA seq
DB search
MVTGADNSPLPKDVLVKFYGLTKFLFLIEEPDDEQARMLSGDFSLENPCLPVKILLRPLK
KRFTFHFTGQRQTARLDRPEWFLTQTLTWIKDHQGFVKSHVQPLADKLNIRHIRAVAEFN
AGLISFAAERLHTVLGLYNTQGTKHENIADTDAAFAHAVDEALGFHRELVLMTGHEANSV
LSVLTKAEIFVRWLAVEKKYALAKLDETLDNEQWSEPIAGGNGSAVGTVIWVPRGADWFI
ALLKTIEDRYAVLPQPGHRLQFLELQLELVEEWRVRLTQIMSAALGALEADSFLAGGARD
PLSAVVNAAHYSREVLLQWAHSLHYLQLHYYRRQFQHFTHQQHQEDSESLGSDDENDDDK
RGKEKSDSEDEALSLKDVEQKAKNLALDELTRRNSAMPELSQFDIMSPTGTRNVPELTSQ
AAEEAGVWAEAPGLLGRLRDAGLKALVDHAFMEFKAAMREYRRQKWHAMLVVEENALCVS
GPLCRPLSALCARLATASARLAPALSVRLRGCLAENVDGYIFEEVVLESWFNTGGTMQFT
HDVKRNLVPAFAPPNKSASQINYLPKLLESCKLLNMEYDDARCLRAQVKKPSIAAKETLL
NQGIRVIEPPEALRILNQRTDLSDAGAGSVMDLF
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggtgactggtgctgataattctccgttgcccaaagatgtcttggtcaaattttatggg
ctaaccaaattcctatttctcatagaggagcctgatgatgagcaggctagaatgctttcc
ggagatttcagcttagaaaatccatgcttaccagtgaaaatattgctacggccgctaaag
aaacgattcacgttccatttcactggacagcgtcagacggcacgtctcgaccgcccggaa
tggttccttacacagactctgacgtggatcaaggatcatcaaggctttgtgaaatcgcat
gttcagccacttgccgataaactgaatataagacatataagagctgtggctgaatttaac
gcaggtctaatctcattcgccgctgaacgactccacactgtcttaggcctgtataacacc
caaggaaccaagcatgagaacatcgccgataccgacgcggcgtttgcccacgctgtggat
gaggctctgggtttccacagagaattggttctgatgaccgggcatgaagccaatagcgtg
ctgtctgtgctgaccaaggctgagatatttgtccggtggcttgcggtggagaagaaatat
gccctggccaaactagacgagactcttgacaatgagcaatggagcgagccgatagctggc
ggcaacggttccgcggtcggcaccgtcatatgggttccgcgcggtgctgactggttcata
gcgctgttgaaaaccatcgaggatcgatacgcggtactaccgcagccgggacatcgcctc
caattcctggagcttcaactagagcttgtggaagaatggcgggtacggttgacgcagatc
atgagcgcagccctgggtgctttggaagcggactcgttcctggcgggcggggcgcgggac
cccctcagtgctgtcgtcaacgctgcgcattactcgcgcgaagtactgctgcagtgggcg
cattcactacattacctgcaactacactactaccggcgtcaattccaacacttcacgcat
cagcagcatcaagaagactcagagtcgttgggctcggacgacgaaaatgacgacgacaaa
cgcggcaaagagaaatctgattccgaggatgaagctttatcactgaaggatgtggaacaa
aaggccaagaatctggcacttgatgagttgacgcgccgaaattccgcgatgcctgaactt
agtcagttcgatatcatgtcaccaacgggcactagaaacgtaccagagctgacgagtcaa
gcggcagaagaggctggcgtgtgggctgaagcgccgggactgctcgggcggctgcgggac
gccggcctcaaagcactagtggatcacgcgtttatggagttcaaagcggctatgcgcgag
taccgaaggcagaaatggcacgcgatgctggtggtggaagaaaacgctctgtgcgtgtca
ggtccactttgccggcctctttccgcgttatgtgctcgtctcgctaccgcttccgcgagg
ctggcgccagccttatcagtgagacttagaggatgcctggctgaaaacgtggacggttac
atatttgaggaagtggtgctagaaagctggttcaacacgggcggcactatgcagttcacg
cacgacgtcaaacggaacctcgtgccagcgttcgcgccgcccaataaaagtgcttctcag
atcaactacttgccgaaattactagaatcctgcaaactactaaacatggaatacgatgac
gcgcgttgccttcgtgcgcaggtaaagaaaccttctatagcggcgaaggagaccctactg
aaccagggaatccgcgtgattgaaccgcctgaggctctaaggatactcaaccagaggaca
gaccttagtgacgcaggagccgggtctgtaatggacttgttctga
DBGET
integrated database retrieval system
