Choristoneura fumiferana (eastern spruce budworm): 141434072
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Entry
141434072 CDS
T11020
Name
(RefSeq) uncharacterized protein
KO
K03504
DNA polymerase delta subunit 3
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03030
DNA replication
cfum03410
Base excision repair
cfum03420
Nucleotide excision repair
cfum03430
Mismatch repair
cfum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
141434072
03410 Base excision repair
141434072
03420 Nucleotide excision repair
141434072
03430 Mismatch repair
141434072
03440 Homologous recombination
141434072
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cfum01009
]
141434072
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfum03032
]
141434072
03400 DNA repair and recombination proteins [BR:
cfum03400
]
141434072
Protein phosphatases and associated proteins [BR:
cfum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
141434072
DNA replication proteins [BR:
cfum03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
141434072
DNA repair and recombination proteins [BR:
cfum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
141434072
MMR (mismatch excision repair)
DNA polymerase delta complex
141434072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
RHH_10
Motif
Other DBs
NCBI-GeneID:
141434072
NCBI-ProteinID:
XP_073952431
LinkDB
All DBs
Position
13:11819716..11821674
Genome browser
AA seq
479 aa
AA seq
DB search
MDDETFGSHLNTLKEMLLDEEKLVTYVSISKELCIHVNESKSLMNKVVQDIRKIQPDTKL
NINYVISGLAEDSKAYTYVCSDNDIADYRKKFKVIFFEHLYSINKGKPAVDKVAFMAITN
FQDYHLCSGLIKSTLCSKRTAEEIGNLKSHSVVADEKPIKPPVKKVKEEKANDVNMNGHG
DTKKVFEVKSEPIKQEKTSPQKDSATNNKQKPVVKNANKPQKGISGFFSRSESTSAKKTT
KDIKSADMEINVKSEKKDTNIHNNVEKMDVDEKIENEPKETKVDKKEEKTSANKNKETNG
ASKNKAKNHNKSLTQIKKNAKVDKKRKRVLCVSDSDSDEEKNDPFVDEDDAHNQQMNIDS
EDEIPPTPAVNTIKVTSALLNPKKRRKIVNKTYTDEEGYILTRKEEVYESLSENEDITET
KENIKTDIQKVDEVSPKKSESKAEVSPKGKKTGTRNSKKKISPPQKGKQASIMSFFNKK
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgaaacgtttggatctcatctgaataccttgaaggaaatgttattagacgag
gaaaaattggtcacctacgtatctatcagcaaagagctctgtatccacgtgaatgaaagc
aaatcgttgatgaacaaagtggttcaagatatcagaaaaatacaacccgacactaagcta
aacatcaactacgttatatcaggattagctgaggacagtaaagcttatacgtatgtgtgc
tcagacaacgatatagctgattatcgtaaaaaattcaaagtcattttcttcgaacattta
tatagtataaataaaggaaaacctgctgtagacaaagttgctttcatggcgatcacaaat
tttcaggattatcatttatgttcaggcttaattaaaagtactttgtgctcaaagcggaca
gcggaagaaattggtaacctaaaatctcacagtgttgtagcagacgagaaaccaattaaa
ccacctgttaagaaggttaaagaagagaaagctaatgatgttaacatgaatgggcatggt
gatacaaaaaaggtgtttgaagtaaaatcagaacctataaagcaagagaaaacatcacct
caaaaagatagtgctaccaacaataagcaaaaaccagtggttaagaatgctaataaaccc
caaaagggcatttctggattcttcagcaggtcagaaagtacttcagcaaagaaaactaca
aaagacatcaaaagtgcagacatggagattaatgtgaaatcggagaaaaaggatacaaac
atacacaataatgttgaaaaaatggatgtagatgaaaaaattgaaaatgaacccaaagaa
acaaaagttgataaaaaggaagaaaaaacttcagctaataaaaataaagaaactaatggg
gcttcaaaaaataaagctaagaaccataacaagtccctaactcagataaaaaagaatgct
aaggttgataaaaaacgaaaaagagttttatgtgtttctgacagtgatagtgatgaggag
aaaaatgatccatttgtggatgaagatgatgcacacaatcaacagatgaacattgactct
gaagatgagatacctcccaccccagctgtcaatactattaaagtaacttcagccttgtta
aaccctaagaagaggagaaagattgttaataaaacctacactgatgaagaaggctacatt
ttaacaaggaaagaagaagtttacgagagtttgtcagaaaatgaagacattacagaaacc
aaggagaacatcaaaacagacattcagaaagttgatgaggtttctcctaaaaagtctgaa
tcaaaagcagaagtatctcctaaggggaaaaagactggaacaaggaatagtaaaaagaaa
atatctccaccacagaaaggaaaacaagcctctattatgagttttttcaataaaaaataa
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