KEGG   Choristoneura fumiferana (eastern spruce budworm): 141434073
Entry
141434073         CDS       T11020                                 
Name
(RefSeq) LOW QUALITY PROTEIN: TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
cfum  Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cfum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    141434073
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cfum03021]
    141434073
   03036 Chromosome and associated proteins [BR:cfum03036]
    141434073
Transcription machinery [BR:cfum03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     141434073
   Coactivators
    SAGA/TFTC/STAGA complex
     141434073
Chromosome and associated proteins [BR:cfum03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     141434073
    STAGA complex
     141434073
    TFTC complex
     141434073
    SAGA complex
     141434073
    SLIK complex
     141434073
SSDB
Motif
Pfam: Beta-prop_WDR3_1st WD40 Beta-prop_WDR5 Beta-prop_WDR3_2nd WD40_Prp19 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EML TFIID_NTD2 Beta-prop_DCAF4 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_Aladin NBCH_WD40 DSE1_N CFAP251_N Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_WDR41 WDR90_beta-prop_4th WD40_RFWD3 ASA1 TRM82_WD Ge1_WD40
Other DBs
NCBI-GeneID: 141434073
NCBI-ProteinID: XP_073952432
LinkDB
Position
13
AA seq 654 aa
MSLMKKTRNDAVKAAVTSYLERRNYPDTDIFNNNNSISQSVEQMAVSTIVQCEASRANSI
LFSCINNDPGHYDVQYTRLLNFIKEIKVENVKNELFGLLTPLLCHMYLEMLRGGHGSAAQ
MFLKRHSVSLPQKDLSYHQPIDGNLPSALYRPNSLEQLFNSLQNGTIDNETPEKDFMNQL
LDDIGSIYTLQEVETRPSIAAFRSCKYDIYLSPSALNMLKAYLAKNSHILLIQILQTWFH
IDINSDNKKKDSEDEDDLDEGMNIRTNSEEKVTSNDIFSKCNGHAEYQSVDKELRDLQDA
IKGVRESTAPLKLYKIAAPDTYLVCAKTDPGCNLLCGGFSNSEIRLWDLGQNNVKRKINC
NISEMELACNVPPEPEAAVDHHNLQIGTGLPLRGHSGPVQAVSVLSREELVLSASHDCSM
RAWRLSDYSCASIYRGHNYPIWCMDVSKNGLFIVTGSHDKTAKLWSLDRTFPVRVFVGHM
SDVTCVKFHPNEAYIATGGADRSVRLWAVCDARLMRVLCGHRGAVRALAFAPSGSCLASA
GDDKKIKVWDLAACTCIHEYRGHHGKVTALDWSAVGRPTLTNRVQPDPNDPSADNALLCS
AGMDGIVKVVWDNHCKNKQASSQEVLTSTYNTKCSHLVDVQVHPNWVVAIGTKR
NT seq 1965 nt   +upstreamnt  +downstreamnt
atgtcgttaatgaaaaaaacgagaaatgatgcggtaaaagcagctgttacatcttattta
gagcgccgtaactaccctgatactgacatttttaacaacaacaattcaattagccaaagt
gttgaacaaatggccgtatctacgatagttcagtgcgaagcaagtcgcgccaactcgata
ttattttcttgcatcaacaacgacccaggacattatgatgtacaatacaccaggttgctc
aacttcataaaggaaataaaagttgaaaatgtaaaaaatgaactcttcgggttattgaca
cccttactctgccacatgtatctggaaatgctccgaggtggccatggcagtgcagcccaa
atgtttttgaagagacactcagtctcacttcctcaaaaagatctatcataccaccaacct
attgatggaaacctgccatcagcactgtatagaccaaatagtcttgaacaactgtttaac
tctttacaaaacggcacaattgataatgagactcctgaaaaagacttcatgaaccagcta
ctggatgatattggatcaatatacacactgcaggaagtagaaacaaggccatccattgca
gcattcagatcatgtaaatatgacatatacctgtcacctagtgcactaaacatgttaaag
gcatacttagcgaaaaatagccacatcctattaatccagattttgcagacttggttccac
atagatattaacagtgacaataaaaaaaaagattccgaagatgaagatgatcttgatgaa
ggcatgaatataagaacaaattcagaagaaaaagttacttcaaatgacatattttctaaa
tgcaatggtcatgctgaatatcagagtgtggacaaggaactgagggacttgcaagatgcc
attaaaggagtacgggagtcaacagcacctctaaaattgtataagatagctgcaccggac
acatatttggtatgtgcaaaaacagatccaggttgtaatttactctgcggtggattcagt
aactctgaaatcagattgtgggatcttggccaaaacaatgtgaagcgaaaaataaactgc
aacatatcagaaatggagctggcctgcaatgtgccgccagagcctgaggcagcagtggat
catcacaatttgcaaattggcaccggtctgccactgcggggtcactcggggcccgtccag
gcggtgagcgtgctgtcgagggaagagctggtgctgtcagcctcgcatgactgcagcatg
cgcgcatggagactgtcggattattcctgcgcctccatttatagggggcacaattacccg
atctggtgcatggacgtgtctaaaaatggactcttcattgtgactggctcccacgacaaa
acagcgaagctatggtcgctggacagaacatttccagtcagagtatttgtagggcatatg
tcagatgttacatgtgtaaaattccatccgaacgaggcatacatagcgaccggcggcgcc
gaccgcagcgtgcggttgtgggccgtttgcgacgcgcgtctcatgcgagtgctgtgcggc
caccgcggcgccgtgcgggcgctcgcattcgcgccctcgggctcctgcctagccagtgct
ggtgacgataagaagataaaagtatgggatttagcggcgtgtacctgtatacacgaatat
aggggtcaccatggtaaggtgaccgctcttgactggtctgctgtggggaggcctaccctc
acaaacagggtccagccagacccaaacgatccttcagcggacaacgcgctactgtgttcc
gccggtatggatggcatcgtcaaagtagtatgggacaaccattgtaaaaataagcaagct
tctagtcaagaagttttgacgtccacatataacacgaaatgttcgcatcttgtggatgta
caagtgcatccaaactgggtggtagccatcggaacgaaaagataa

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