Choristoneura fumiferana (eastern spruce budworm): 141434106
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Entry
141434106 CDS
T11020
Symbol
CstF64
Name
(RefSeq) cleavage stimulation factor subunit 2 CstF64 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141434106 (CstF64)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfum03019
]
141434106 (CstF64)
Messenger RNA biogenesis [BR:
cfum03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
141434106 (CstF64)
U7-dependent histone pre-mRNA processing factors
141434106 (CstF64)
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Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_10
RRM_7
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
141434106
NCBI-ProteinID:
XP_073952489
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All DBs
Position
13:complement(13909284..13916905)
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AA seq
396 aa
AA seq
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MDKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKG
YGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENPYGEAV
EPEKAPEAISKAVATLPPEQMFELMKQMKLCVQNNPTEARNMLLQNPQLAYALLQAQVIM
RIVDPTTAVGMLHPSNPVPPINHPGDKLPLPNPYISSGPNIPQPVSQPPPLLANPVPPPA
REFVPRPAAMADIDLRGSRAAPPALLDQDMRSLPPMPHPVPPPHTDNCATLLETQEIAYP
RDPRLAGNQFNSDPRMRSNDPRTQPKMPPQMPPGMPSMAQARTIQGIPSGASDQEKAALI
MQVLQLSDEQIALLPPEQRASILMLKEQIAKSTQQR
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaagcaaagaaaaagaggaacaaagtatcatggataaatccatgagatctgtt
ttcgtcggtaacataccttacgaagccactgaagaaaagctgaaggacatattcagtgaa
gttgggcctgtattgtcattcaaactagtatttgaccgagagacaggcaagcccaaaggc
tatgggttctgtgagtacaaggatcaagaaactgcactcagtgccatgaggaatctgaat
ggttatgagattggtgggagatcattaagagttgataatgcttgtactgagaagtcgaga
atggaaatgcaagctctgatgcagggaccacaggtagagaatccatatggagaagctgtg
gaacctgagaaggctccggaagccatcagcaaagctgtggccactctacccccagagcag
atgtttgaattgatgaagcagatgaagctatgtgtgcagaacaacccaacagaagccagg
aacatgttgctgcagaatccccagttggcttatgcattgctgcaagcacaagtcatcatg
aggattgtggatcccaccacagcagttggtatgctgcatcccagcaatcctgtgccgcca
atcaatcatcctggggacaaattgcccttgcctaacccctacatttccagcgggcctaac
ataccacagccagtatcgcaacccccgccgctcttggccaatccggttccgccaccggca
cgggagtttgtccctcggccggctgcgatggcggacattgacctccgcggctcgcgcgcg
gcgccgcccgcgcttctcgatcaggacatgcgcagtctgccgccgatgccgcaccccgta
ccgcccccgcataccgataattgtgctacccttttggaaacacaagaaattgcgtaccca
cgcgacccgcgcctcgccggcaaccagttcaattcggacccgcgcatgcgctccaacgac
ccgcgcacccagcctaagatgccgccgcagatgccgccaggaatgccaagcatggcccag
gccaggactatccagggcataccttctggcgcctcggaccaggaaaaggctgcgttgata
atgcaggtgctgcagttatccgacgaacagatcgctctgttaccgccggagcagcgcgcc
agtatcctcatgctcaaagagcaaatcgccaaaagcacgcagcaacgataa
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