KEGG   Choristoneura fumiferana (eastern spruce budworm): 141434116
Entry
141434116         CDS       T11020                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cfum  Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cfum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    141434116
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfum03019]
    141434116
   03041 Spliceosome [BR:cfum03041]
    141434116
Messenger RNA biogenesis [BR:cfum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     141434116
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     141434116
Spliceosome [BR:cfum03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    141434116
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 RRM_3
Other DBs
NCBI-GeneID: 141434116
NCBI-ProteinID: XP_073952503
LinkDB
Position
13:complement(14098487..14108302)
AA seq 329 aa
MNMKPSGGGGDEYEEPEHMRKLFIGGLDYRTTDTSLKEFYEQWGEIVDVVVMKDPQTKRS
RGFGFITYSRAQMVDDAQSNRPHKIDGRVVEPKRAVPREEIKRPDASATVKKLFVGGLKQ
DIEEEDLREYFSSYGNIVSVSLVTEKDTGKKRGFGFIEFEDYDPVDRICLQQNHKIKGRH
LDVKKALSKTEMAAGGPGGGGGGRRGGRGGGSGGWGNRGSDNQDWGNNQGYGQGGWGNQN
PWESNNQGGGGGAWGNQGYGDQSGWGQSSDNFGGGYQQNYSGGPMRANYNSSRPQPYNQG
GQSGVGGGYNTGGGNYNMAAQGGGNQRRF
NT seq 990 nt   +upstreamnt  +downstreamnt
atgaacatgaagcctagtggaggtggtggtgatgaatacgaagagccggaacatatgcgt
aagctgtttatcggtgggctcgattatcggacaaccgatacgtctttgaaagagttttac
gagcaatggggcgaaattgtagacgtggtggtaatgaaagatccacagacgaagcggtca
agaggcttcggattcatcacgtactcccgtgcacaaatggttgatgatgcacagagtaac
agaccgcataagattgatggaagggttgtagaacctaaacgggctgtgcccagagaagaa
atcaagaggcctgatgctagtgcaaccgttaaaaagctgttcgttggtggcttaaagcaa
gacattgaggaggaagatttgagagaatactttagttcttatgggaatattgtatctgtt
agcctggttacggagaaagatacagggaaaaagagagggtttggtttcatcgagtttgaa
gattatgaccctgtagatagaatatgcttgcagcaaaaccacaaaataaaaggccgccat
ttagacgtaaagaaggccttgtctaagactgagatggcagcgggcggcccagggggtggc
ggcggcgggcgacgcgggggccgaggcggcggcagtggcggctggggcaaccgagggagc
gacaaccaggactggggtaacaatcaaggatacggacaaggcggatggggcaaccaaaac
ccatgggagtccaataaccaaggtggtggcggtggtgcttggggcaatcagggttatggg
gaccaaagtggctggggccagtcatcagacaacttcgggggcggctaccagcaaaactat
tccggtggacccatgcgcgctaattacaatagttcgcgtcctcagccatataatcaaggt
gggcaaagcggcgttggtggcgggtataatacaggcggcggtaactacaacatggccgcg
caaggcggcggcaatcagcgccggttctag

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