Choristoneura fumiferana (eastern spruce budworm): 141434142
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Entry
141434142 CDS
T11020
Symbol
vtd
Name
(RefSeq) RAD21 cohesin complex component verthandi isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfum03036
]
141434142 (vtd)
Chromosome and associated proteins [BR:
cfum03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
141434142 (vtd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
Decapeptide
CTD
SMC_ScpA
Motif
Other DBs
NCBI-GeneID:
141434142
NCBI-ProteinID:
XP_073952537
LinkDB
All DBs
Position
13:complement(15100987..15119937)
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AA seq
949 aa
AA seq
DB search
MFYAHFVLAKKGPLAKIWLAAHWDKKLTKAHVFETNIEKSVDGILKPKVKMALRTSGHLL
LGVVRIYSRKAKYLLQDCNEAFVKIKMAFRPGMVDLPEEHREAAMNAITLPEVFHDFDSA
MPELNEVDIEAQFSLNQSRAEEITMREDYGSLNLVTHDDGFGDMGFDTDNPDIMREAIGN
EGGLEQSNLLFADGSSLELGGKEAAAAAGPALSAPGHERRLEAAPHAAMDDGFGGTIGDV
ADFGHAGGLFEGDLFGDVTAGSAAGGAAAGLAGTSAQPQSLQAEIEAAGVSGGDAGAAAA
ADAPDSDDDMGDHYDAGNSPQHSWGGSPPHDMDEPRPLDDAADLMPPPPPAAPRPPSVRP
MEVDEPPGLAEEPPAAAPAADNTTLLQNDEESFALAPVDATVLKGITKTKRKRKLIVDEV
KNISGEEMKNQLSNTSDIVTTLDLAPPTRRLMHWKETGGVEKLFTLPARPIPSRVLFKKY
QRNMTLRNENEDGDAKSPEHPEPSTARRGPRKRRHEETMQPPETPAPTPAADIEPPTPMP
QEYEPSVEPEREAYPQTPRSEADEAPQTPGMLSALGPPLTPGALGPLTPGTLLQGGLTPG
NLPLGGLTPGGLQHGGMTPVGLQHGDSDFGAGGMTPAHLHHGGMTPGLGLDSGMTPGGLG
HGGLTPAGLHHGGITPGGLDHGGMTPVGLQHGGMTPAGLQHGGMTPAGLQHGGMTPVGLQ
HGGMTPVGLQHGGMTPVGLQHGGMTPGGLQHGGMTPAGLQHGGMTPSGLQHGMLGHGLEQ
LPMMPALEGEAPLLARAPPPHELHVPMEPLPLHALTDHPHYQSGMQMTNLGYEDNNGHHS
PQHDYDLPPSVENPEEGEREAGETDEQFEERVLNRRAAQLFAAMRPKLAAGNELAFNELA
PRHNNRKQVAQKFYSLLVLKKHQVLKLIQQETYGPITIMKGAQFETEAI
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgttttacgcacattttgtgctggccaaaaagggcccgctagccaaaatttggctggcg
gcccactgggacaagaagctgacgaaggcccatgtgtttgagacaaatattgagaagtca
gttgatggtattttgaagcctaaagtgaagatggctttgcggacttctggtcatctcctg
cttggcgttgtcagaatttactccagaaaggccaaatatttgctgcaggattgtaatgaa
gcattcgtcaagatcaagatggccttcaggccaggcatggtggacctgcccgaggagcac
agagaggccgccatgaatgccattaccttgcctgaggttttccacgactttgactccgct
atgccagagttgaatgaggtagacattgaagcccaattctctctcaaccaatcccgtgcc
gaggagatcactatgcgcgaggactatggatccctaaatctagtcactcatgatgatggg
tttggggatatgggatttgatactgacaatcccgatatcatgcgagaagctattggcaac
gagggaggactggaacagagtaacctcctgttcgcggacgggtcatccctggagctgggc
ggcaaggaggcggcggcggcggccgggcccgcgctgtcggcgccgggccacgagcggcgc
ctcgaggccgcgccgcacgcagccatggacgatggctttggcggcaccatcggggacgtc
gctgattttggacatgcgggcgggctgttcgagggagacttgttcggcgacgtgacggcg
ggcagcgcggcgggcggcgcggccgcggggctcgccggcacctccgcgcagccgcagtca
ctgcaggctgagatagaagcggcgggggtgagcggtggcgacgcgggcgcggcggcggcg
gcggacgcacctgactccgatgacgacatgggcgaccactatgacgcaggcaactcgccg
caacacagctggggcgggtctccgccgcacgacatggacgagccgcggccgctggacgac
gcggccgacctgatgccgccaccgccgcccgccgcgccgcgcccgccctccgtcaggccc
atggaggtggacgagccgccgggcttggcagaggagcctccagccgcggcgccggcggcc
gataacaccacattgctgcaaaacgacgaggagtccttcgcgctcgcgccggtcgacgct
acagtcctcaaaggcatcaccaaaacgaagcgcaaacgcaagctgatcgtggacgaagta
aagaacatatcgggagaagagatgaagaatcagctcagtaacacatcggacatcgtaacc
acgctagacctagcgcctcccaccaggaggctcatgcactggaaggagacgggaggcgtc
gagaaactgttcacactgcccgccaggccgataccttcgagagttctgttcaagaaatac
caacgcaacatgacgctccgcaacgagaatgaggatggcgacgccaagtcccccgagcac
cccgagcccagcaccgcgcgccgcggcccgcgcaagcgccggcacgaggagaccatgcag
ccaccagaaacgccagcgcccactcctgccgccgatatcgaaccccccacccccatgccg
caggagtatgaaccttcagtcgagccggagagggaggcctacccgcagacgccacgctcc
gaggccgacgaggctccgcagacacccggcatgctcagcgcgctgggcccccccctgaca
ccgggcgcgctcgggcccctcactccgggcacgctgctgcagggcggcctaacgcccggg
aacttgccgctcggaggccttacgccaggagggctccaacacggcggcatgacgcccgtg
ggcctgcagcacggggacagcgacttcggcgccggcggcatgacccctgctcaccttcac
catggcggcatgactcccggcctggggctggacagcggcatgacgccgggcgggctcggc
cacggcgggctgacgccggccggccttcatcacggtggaattacgccaggaggtttagac
cacggcggtatgacaccagtcggtctccagcacggaggcatgacgccggccggcctccaa
catggcggcatgacgcccgccgggctacagcacggcgggatgacgccagtgggtctacag
cacggaggaatgactcccgtggggttacaacacggtggcatgacaccagtagggctgcag
cacggaggaatgaccccgggagggttgcagcacggcggcatgacacctgcgggattacag
catggcggtatgacgccttctggtctgcagcacggcatgttggggcacgggctggagcag
ctgccgatgatgccggcgctggagggcgaggcgccgctgctggcgcgcgcgccgccgccg
cacgagctgcacgtgcccatggagccgctgccgctgcacgcgctcacggaccacccgcac
taccagtccggtatgcagatgaccaatttgggctacgaggacaacaatggccaccacagt
ccacagcacgactacgatttaccgcccagtgtcgaaaatccggaagaaggcgagcgtgag
gcgggcgagaccgacgagcagttcgaggagcgagtgctgaaccggcgcgcggcgcagctg
ttcgcggccatgcggcccaagctcgccgccgggaacgagctcgcgttcaatgagctcgcg
ccacggcacaacaaccggaaacaggtggcacagaagttctacagtttacttgtcctcaaa
aagcaccaagtactaaagttaatacaacaagaaacatatggacctattactattatgaag
ggcgcccaatttgagacggaggcgatttaa
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