Choristoneura fumiferana (eastern spruce budworm): 141434382
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Entry
141434382 CDS
T11020
Name
(RefSeq) uncharacterized protein
KO
K03504
DNA polymerase delta subunit 3
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03030
DNA replication
cfum03410
Base excision repair
cfum03420
Nucleotide excision repair
cfum03430
Mismatch repair
cfum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
141434382
03410 Base excision repair
141434382
03420 Nucleotide excision repair
141434382
03430 Mismatch repair
141434382
03440 Homologous recombination
141434382
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cfum01009
]
141434382
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfum03032
]
141434382
03400 DNA repair and recombination proteins [BR:
cfum03400
]
141434382
Protein phosphatases and associated proteins [BR:
cfum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
141434382
DNA replication proteins [BR:
cfum03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
141434382
DNA repair and recombination proteins [BR:
cfum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
141434382
MMR (mismatch excision repair)
DNA polymerase delta complex
141434382
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CDC27
MABP
RHH_10
Motif
Other DBs
NCBI-GeneID:
141434382
NCBI-ProteinID:
XP_073952903
LinkDB
All DBs
Position
13:11811202..11812915
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AA seq
479 aa
AA seq
DB search
MDDETFGSHLNTLKEMLLDEEKLVTYVSISKELCIHVNESKSLMNKVVQDIRKIQPDTKL
NINYVISGLAEDSKAYTYVCSDNDIADYRKKFKVIFFEHLYSINKGKPAVDKVAFMAITN
FQDYHLCSGLIKSTLCSKRTAEEIGNLKSHSVVADEKPIKPPVKKVKEEKANDVNMNGHG
DTKKVFEVKSEPIKQEKTSPKKDSATNNKQKPVVKNANKPQKGISGFFSRSESTSAKKTT
KDIKSADMEINVKSEKKDTNIHNNVEKMDVDEKIENEPKETKVDKKEEKTSANKNKETNG
ASKNKAKNHNKSLTQIKKNAKVDKKRKRVLCVSDSDSDEEKNDPFVDEDDAHNQQMNIDS
EDEIPPTPAVNTIKVTSALLNPKKRRKIVNKTYTDEEGYILTRKEEVYESLSENEDITET
KENIKTDIQKVDEVSPKKSESKAEVSPKGKKTGTRNSKKKISPPQKGKQASIMSFFNKK
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgaaacgtttggatctcatctgaataccttgaaggaaatgttattagacgaa
gaaaaattggtcacctacgtatctatcagcaaagagctctgtatccacgtgaatgaaagc
aaatcgctgatgaacaaagtggttcaagatatcagaaaaatacaacccgacactaagcta
aacatcaactacgttatatcaggattagctgaggacagtaaagcttatacgtatgtgtgc
tcagacaacgatatagctgattatcgtaaaaaattcaaagtcattttcttcgaacattta
tatagtataaataaaggaaaacctgctgtagacaaagttgctttcatggcgatcacaaat
tttcaggattatcatttatgttcaggcttaattaaaagtactttgtgctcaaagcggaca
gcggaagaaattggtaacctaaaatctcacagtgttgtagcagacgagaaaccaattaaa
ccacctgttaagaaggttaaagaagagaaagctaatgatgttaacatgaatgggcatggt
gatacaaaaaaggtgtttgaagtaaaatcagaacctataaagcaagagaaaacatcacct
aaaaaagatagtgctaccaacaataagcaaaaaccagtggttaagaatgctaataaaccc
caaaagggcatttctggattcttcagcaggtcagaaagtacttcagcaaagaaaactaca
aaagacatcaaaagtgcagacatggagattaatgtgaaatcggagaaaaaggatacaaac
atacacaataacgttgaaaaaatggatgtagatgaaaaaattgaaaatgaacccaaagaa
acaaaagttgataaaaaggaagaaaaaacttcagctaataaaaataaagaaactaatggg
gcttcaaaaaataaagctaagaaccataacaagtccctaactcagataaaaaagaatgct
aaggttgataaaaaacgaaaaagagttttatgtgtttctgacagtgatagtgatgaggag
aaaaatgatccatttgtggatgaagatgatgcacacaatcaacagatgaacattgactct
gaagatgagatacctcccaccccagctgtcaatactattaaagtaacttcagccttgtta
aaccctaagaagaggagaaagattgttaataaaacctatactgatgaagaaggctacatt
ttaacaaggaaagaagaagtttacgagagtttgtcagaaaatgaagacattacagaaacc
aaggaaaacatcaaaacagacattcagaaagttgatgaggtttctcctaaaaagtctgaa
tcaaaagcagaagtatctcctaaggggaaaaagactggaacaaggaatagtaaaaagaaa
atatctccaccacagaaaggaaaacaagcctctattatgagttttttcaataaaaaataa
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