Choristoneura fumiferana (eastern spruce budworm): 141434866
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Entry
141434866 CDS
T11020
Symbol
retn
Name
(RefSeq) retained isoform X1
KO
K25856
AT-rich interactive domain-containing protein 3
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfum03000
]
141434866 (retn)
Transcription factors [BR:
cfum03000
]
Eukaryotic type
Helix-turn-helix
ARID
141434866 (retn)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ARID
GatD_N
Motif
Other DBs
NCBI-GeneID:
141434866
NCBI-ProteinID:
XP_073953439
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Position
14:complement(6395338..6548935)
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AA seq
593 aa
AA seq
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MADADRDSDLGDDSPVLPRTKNEILAGKYISETLDVRIISELHESPRSEGESSGEQSCES
SDEGVGRDVSAHQPIQQHQPIQHQPIQHPPLHQQPHNMNHHAVNHQTINNHQHHQNHHQR
NSPRPLERELKVRDDFESLKSSLHPHLSSLASLAQGAPLSAPTSVFALASGGAPGGFPYA
PPAFLAPAPPPPAQPAGSASSSSSEGSAAGWSFEEQYKQVRQLYEISDDPQRKEFLDDLF
SFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITS
AAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMSSPFQ
PPLNRMPALAQLSQHMQPLSLSLGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRE
LMRNGSESPPGSGPAPMMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQRISLHS
EALNLSESPNSSLGAGGIKREACRSPPPPAKRRTPRPVSPRAPSPRPASTPAPPQHNGNG
VNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQNSSGQNGHRQMVS
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgccgaccgtgactcggacttaggagacgacagccccgtgttgccacgaact
aaaaacgagattttggctggaaaatacatctcagaaacactagatgttcggattattagt
gaactacatgagtccccgcggtcggaaggcgagtcgtccggcgagcagtcgtgcgagagc
tcagacgagggcgtcggtcgtgacgtctcagcccaccagcccatccagcagcaccagccc
atccaacaccagcctatccagcatccaccgctgcatcagcaaccccacaacatgaaccac
cacgcggtcaatcaccagactataaataaccaccagcatcaccagaaccaccatcagagg
aactcaccgcgcccactcgagagggaattgaaggtccgcgatgacttcgagtccctcaaa
tcgtccctccatcctcatctatcgtcgctggcttcactcgctcagggggctccgctgtcc
gcgccgacgagcgtcttcgcgctggccagcgggggagcccccgggggcttcccttacgcc
cccccggcgttcctggctcccgcgccaccgccgccagcgcagcctgccggctcggcatcc
tcgtcatcttcagaaggcagcgctgccggctggagcttcgaagaacagtataagcaagtt
cgtcagttgtacgaaatcagtgatgacccccaaaggaaggaattcctcgatgacctcttt
tccttcatgcaaaaacgaggcactcctataaaccggctgccgattatggctaagtcggtg
ctggatctatacgagctctacaatctggtgatagcccgcggcgggctcgtcgaggtcatc
aacaaaaagctgtggcaggagatcatcaaggggctgcggctgccgtcttctataacatct
gctgctttcacactgcgcacacaatacatgaagtacctatacgactacgaatgcgagaag
aagaacctgtcgactcgcagcgagttggatgccgccatcgaaggcaacaagcgcgagggc
cgccgcgcctccggccagtacgacgcgcaagccgctcttgccatgtcttcccccttccag
ccccccctgaaccgcatgccggcgctggcgcagctgtcgcagcacatgcagcccctctcg
ctctcgctgggcggcgtgccgcgcctcccgccgttgccgccacacgcgccgcacatatcg
cagcatgacatcgagtacagagtgcgcgagtacatgaaaatgatacagcagcaacgggag
ctgatgcgtaacggatcggagtccccgccgggatccgggcccgcgcctatgatgtccccg
cgcgacgccgccgctctcagcgccatcgacgtctcgcgactcacgctctggtcgctctac
aacaacaacaacaacagcccccagccagacctcgagccgcaacgaatttctctccacagc
gaggcgctgaacttgagtgagagccccaactcctctctgggtgctggcggcatcaagcgc
gaggcttgccgctcaccccctccccccgccaagcgccgtaccccgcgccccgtctccccc
cgtgcgccctccccgcgccccgccagtactcctgcaccaccacaacacaatggcaacggg
gtgaatggggcagccttcaaaattaccactagaggagatgcgagcacaggagaccagcag
ttagtagtatctatcgagctgaatggcgtgacatacgaaggcgttctatttccttcacag
aactccagcgggcagaacggacacaggcaaatggtctcttaa
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