Choristoneura fumiferana (eastern spruce budworm): 141434949
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Entry
141434949 CDS
T11020
Symbol
Srp54
Name
(RefSeq) splicing regulatory protein 54
KO
K13165
splicing regulatory glutamine/lysine-rich protein 1
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfum03041
]
141434949 (Srp54)
Spliceosome [BR:
cfum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
141434949 (Srp54)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF1866
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
141434949
NCBI-ProteinID:
XP_073953540
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All DBs
Position
14:8057494..8073479
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AA seq
591 aa
AA seq
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MCKSSKMVSGSTRVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRIC
YVKYYDSATVNVAQHMTNTVFIDRALIVIPMQSGEIPDEHRALEMSNNGTLVPGLSSVEP
RLPAHIINTLEGVPPSQVIQSHDPKLAAAGLPPYPPVPATYDSRKIEEIRRTVVVSDADN
LNYMQLIEHFGQAGEVKYVRYADREADQKKYVLIEMTEQESVLKALQLNGSVVDGHTIKV
FHSTQAISKPQTKSNEAAQREIEEAMCRVKEAQNLISAAIDPVIGLLSKDKRRSRSRSRS
RRRSRSRSRRSRSRHRGGGKRSRSRSRHRSRRSRSRHRHRTRSRSHHRSSRRSRSRSRHR
ASRSKRDRSRDRKDKKDSTEKPKDKSKSPPPPPKEVEKEETKPEPETNGNSVETKSKAST
PAEDKEKEPEKERSPSKKRERSRSKERKRDRSRSRRRSHSRSRRKRSRSRRRSRSRKRSR
SKERKRSRSRDRKRTRSRDRKRSRSRDRKRTRSRDRKRTRSRDRKRSRSGSRRSKSRSHR
DSKTPHDRRSRDRSPNLSTIEEKEVTIVENKAPDIAEDKNSPDNMDISNSP
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaaatcatcgaaaatggtgtccggcagcacgagggtgatacaagtcaccaacatc
gctcctcaggcgacgaaggatcaaatgcagaccttgttcgggtatttgggtaaaattgat
gatataagactgtacccaactattcgggatgtctcctgccccgtacaatcgcgtatttgt
tacgtgaaatactatgattcggcgacggtgaatgtcgcgcaacatatgacaaacacagtg
ttcatagaccgggctttgatcgtaattcctatgcagtctggtgagattccggatgaacac
cgagcgttggagatgtctaacaacggtacgctcgtgccggggctcagttccgtcgaacct
agacttcccgcgcacatcattaacaccctggaaggagtcccgcctagtcaagtgatacag
tcacatgaccctaagcttgctgcagcaggattgccgccttatccgccggttccagcgact
tacgactcaagaaagattgaagaaattaggcggacagttgttgtgagtgatgcagacaac
ttgaactacatgcagttaattgaacactttggtcaagcaggagaagtaaaatacgtgcgc
tacgctgaccgagaagctgatcagaagaagtatgtgctcattgaaatgacagagcaagag
agtgttctaaaagcattgcaattgaatggttctgttgttgatggacatactataaaggtg
ttccattctactcaagctatctccaagcctcaaactaaaagcaacgaagctgcccagcgt
gagattgaggaagccatgtgccgtgtgaaagaagcacagaacctgatctcagctgctatt
gatcctgttattggactcctttctaaggataaaagaagatcgcggtcccggtctcggtcg
cggcggcggtcacggtcgcgctcccggcgctcgcgctcgcggcaccgcggcggtggcaag
cgctcacgctcccgctcccgccaccgctcgcgccgctcccgctcgcgccaccgccaccgc
accaggtcccgctcgcaccaccgcagctcccgtcgctcgcggtcgcgttcacggcaccgc
gcctcgcgttccaagcgcgaccgctcccgcgaccgcaaggacaagaaggactccaccgag
aaaccgaaggacaaatccaagtcgcctccgccgccgcccaaagaagtcgagaaggaggaa
accaaaccggagcccgaaactaacgggaacagcgtcgaaactaaatcgaaggcgtccact
ccggccgaggataaagaaaaggaaccagagaaggagaggtccccgtctaaaaagagggag
aggtcgcgatcgaaggagcggaagcgggatcggtctcgctcgaggcgcaggtcgcactcg
cgttcgaggaggaagcggtcacgctcgcggcgccgctcgcgctcccgcaagcggtcacgc
tccaaggaaaggaaacgatcgcgttcccgggacaggaagcgcacgcgctctcgcgacagg
aagagatccagatccagagaccgcaagcgcactcggtcgcgagaccgcaagcgcacccgc
tcgcgcgaccgcaagcgctcccgctcgggcagccgccgctccaagagccgctcgcaccgc
gactccaaaacaccccacgaccgccgctcgagggaccgcagccctaacctcagcaccata
gaagaaaaggaagttacgattgttgaaaacaaggcccccgacatagctgaagacaaaaac
tccccagacaacatggatatttctaattccccgtaa
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