Choristoneura fumiferana (eastern spruce budworm): 141435313
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Entry
141435313 CDS
T11020
Name
(RefSeq) RNA polymerase II-associated protein 3-like isoform X1
KO
K23002
RNA polymerase II-associated protein 3
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfum03021
]
141435313
Transcription machinery [BR:
cfum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
141435313
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RPAP3_C
TPR_1
TPR_2
TPR_11
TPR_16
TPR_9
TPR_8
TPR_17
TPR_BSK1_C
TPR_12
TPR_14
TPR_7
TPR_19
BTAD
DUF7877
HTH_6
Motif
Other DBs
NCBI-GeneID:
141435313
NCBI-ProteinID:
XP_073954115
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All DBs
Position
14:16212732..16226638
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AA seq
521 aa
AA seq
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MDKAFEIQRQVRDNVSTLKTYLTDLQNWEVEMKRKEAALNGEFEQDLPPVRSKAKKEKPV
EKKKTVEKRLKSSDYKAWDSFDADKACEEIDMEDVGPTSLDGKKSQQAKMEKLREEAHHE
KERGNAFVKQEKWDEAIACYNRAIELVKDDAIYYANRGLCYLKKDSLHQAETDCTEALRL
DPTYVKALQRRATARERLGSLRAASHDLSEVLKYEPHNGPARKQLEVIKNRMGTKGSKSK
SSPSSTPTSENKPFPRSTGQAKIVELKDEPALPVPELSEEEKWKNGVGECITVIKPVKKP
PHLRSKRALKTVPILEIPLGKTEPEKPPTRLKIIEIEDDLSKGDTNNNDSNKSAKPNIMD
SSGDMKSTDAKDVVVTSPESEKLVKDVIGSEKDVSLENMVPPVNSVQFMAEWKYMKGNER
ARSDYLSIIDPVKIPSIFDNALESDVLSDLLSMLAADTSKFADKTITAYLKGLTRVKRFS
ALAMFLSTNDKQILKKLLQHCKTAEHCSENEIADLMNKFEL
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagctttcgagatccaacggcaggtccgggataacgtttcaacattaaaaaca
tacctcacagatttacagaactgggaggttgaaatgaaacgtaaagaggccgccttgaac
ggtgaatttgagcaggacttacctccagtaagaagcaaggctaaaaaggagaagccggtg
gagaaaaaaaagacagttgaaaaacgtttaaaatcatcagattacaaagcgtgggacagt
tttgatgctgacaaagcttgcgaggaaatagacatggaagatgtgggtcctacatctttg
gatggcaagaagagtcagcaggctaagatggagaagctgagagaggaggctcatcatgag
aaagagagaggcaacgcttttgtcaagcaggagaaatgggacgaggctattgcctgctac
aaccgagccatcgaactggtaaaagatgacgccatttactacgccaatagagggctctgt
taccttaagaaagacagcctccatcaagcagaaacggactgcacggaagcactccgcctg
gacccaacgtatgtcaaagccctccagcgccgagcgaccgcaagagagcgcctgggctca
ctccgggcagcctcacacgatctcagtgaagtgctcaagtatgaaccccacaacggaccg
gcgcggaaacagctggaggttattaaaaaccgcatggggaccaaggggtctaagtccaaa
tcatcaccatcttcaacaccgacttcagagaacaagcctttcccgaggagtactgggcag
gcaaagatagtggagctgaaagacgaaccagcgctaccggtgcccgagttgagtgaggag
gagaagtggaagaatggagtcggagaatgtatcacggtcatcaaaccggtcaagaagcca
cctcatttgcggtccaagagagcccttaagacggtacccatcctcgaaatcccactcggt
aagactgaaccagaaaaacctccgactagacttaaaatcatagaaatcgaagacgactta
tctaaaggtgatacaaacaacaacgactcaaacaaatccgccaaacccaacatcatggac
agctcgggcgacatgaagtcaacggatgccaaagatgtagtggtcactagtccggagtcg
gagaagttggtcaaagatgtcattgggtcggagaaagatgtcagcttggagaatatggtg
ccgccagtgaatagcgttcagtttatggctgaatggaagtatatgaaagggaatgaacgc
gctaggagcgattatttgagtattatagatccggtaaaaatcccttcgatcttcgacaac
gcgctggaaagcgacgtgctctctgatctactgagcatgctcgccgctgacacgagcaag
ttcgccgacaaaactatcacagcgtacctgaagggccttacgagggtgaagcggttctcg
gcgctcgctatgttcctctctaccaatgataaacaaattttgaaaaaactcctacaacat
tgcaagaccgcggaacactgttctgaaaacgaaattgctgatctgatgaacaaatttgag
ctttaa
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