Choristoneura fumiferana (eastern spruce budworm): 141436042
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Entry
141436042 CDS
T11020
Name
(RefSeq) ras-related protein Rab-4B-like
KO
K07880
Ras-related protein Rab-4B
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfum04131
]
141436042
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfum04147
]
141436042
04031 GTP-binding proteins [BR:
cfum04031
]
141436042
Membrane trafficking [BR:
cfum04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
141436042
Exosome [BR:
cfum04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
141436042
GTP-binding proteins [BR:
cfum04031
]
Small (monomeric) G-proteins
Rab Family
Rab2/4/14 [OT]
141436042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
RsgA_GTPase
AAA_7
Gtr1_RagA
Dynamin_N
ATP_bind_1
AAA_16
Septin
SRPRB
AAA_22
ABC_tran
AIG1
AAA_24
SLFN-g3_helicase
P-loop_TraG
AAA_29
FtsK_SpoIIIE
cobW
Motif
Other DBs
NCBI-GeneID:
141436042
NCBI-ProteinID:
XP_073954978
LinkDB
All DBs
Position
16:complement(9615356..9621026)
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AA seq
214 aa
AA seq
DB search
MSETYEYLFKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQ
IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRDSFNALANWLRDARTLASPNIVILLVG
NKKDLEDSREVTFTEASQFAQENELVFLETSAKTGENVEEAFLKCSKTILAKIETGELDP
ERIGSGIQYGTGASKRLAAPRKPARAPSECACRV
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaacttatgaatatttattcaaattcttggtgatcggaagcgcaggcacggga
aagtccagccttcttaataattttattggtaacaaattcaaagaagatagatgtcatact
attggggtagaatttggatccaaaatcgtcaatatagggggcaaatcaactaaattacaa
atttgggatactgcggggcaagagaggttccgctctgtgacacggtcatactaccgaggg
gctgctggagcactactggtgtacgatatcacctcgcgggactcatttaacgcgttagct
aactggttgagagatgcgcgtactctagctagccccaacattgttatattgcttgttgga
aataaaaaagacttggaagattcccgagaggtcacatttacggaagcaagtcaatttgct
caggaaaatgagttggtgttcttggaaaccagtgcaaagacaggtgaaaatgtagaagag
gcatttttaaagtgctccaaaacaatccttgctaagatagaaacaggtgagttagacccc
gagagaataggatcaggcattcagtatgggacaggcgcttcaaagaggctagcggctcct
aggaagccagctcgagcaccctcagaatgtgcttgccgtgtgtaa
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integrated database retrieval system
