KEGG   Choristoneura fumiferana (eastern spruce budworm): 141436156
Entry
141436156         CDS       T11020                                 
Name
(RefSeq) LOW QUALITY PROTEIN: MMS19 nucleotide excision repair protein-like
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
cfum  Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:cfum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cfum03036]
    141436156
   03400 DNA repair and recombination proteins [BR:cfum03400]
    141436156
Chromosome and associated proteins [BR:cfum03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    141436156
DNA repair and recombination proteins [BR:cfum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     141436156
SSDB
Motif
Pfam: MMS19_N MMS19_C
Other DBs
NCBI-GeneID: 141436156
NCBI-ProteinID: XP_073955139
LinkDB
Position
16:15565251..15576140
AA seq 971 aa
MVSVWQTPELSDEIIKGDEIFESTTCIVADIVSAKIDIMCLVQNMAGVLTSKEVEYREKG
MRFFTKVLKELPKDYLTQMQVRFISNFYTDRLRDYHRVIPPVLEGYLAIFEMENYDMQKS
GEFLRALFREVPCQSQVRQDRLNIYLIIKKLLEKDVEHMKSMGPNFAYGFISAMDGERDP
RNLLFLFEFIPTFLRHIPLGHLVDGMFEVISCYYPIDFHPSPDDPQAVSRQDLADELGPC
LCAIPEFGEQCLILLIDKLDSTLRTAKMDSLKLLALSCRTFKAEAYGPFLKALWSSLNRE
ISHKTDDELKMSAHEALSTLIAKLATSANTDQVFENFIKGILISMQTAIAESTTVAQLVQ
ATKVLLTTANASKESCVIVTKAMIPAALAYYELNPSPKLQIATLDFLGDLNDITKHWEVT
EQIEKQIIEIPQLCLTAVSQPSKEYQIAGXKTLIRVKSVLQSELVLPFVEVLIHNIQHSQ
ENDVLSVSVEAVHAIARKYPELIMSYVVKGKCDLDNLTRDKDALQKRLNLLSNLASIDDF
TKVIIEEMLKVITSDDQDASKVVEALSESMSNASLYTVQKVTQIESDYGLINSILTWLLK
ELSSTTKESLTHGFALISNTMSSLPAEKQQIVLSKHMQFVLEKSKTEESYFVVLECLYNS
LHETVYEPNFPDIMSLSLQWALLSDNDEIRNKACGLVAHFLNKAPFGDKFDALYEVLKNH
LSSCNRDDEQLCPKVIMLYGWIAKALVLRGSDMFHFWLQKIIAVLSHPNYTKLGAKAIHL
IMTDFPDHLNAKYHCRISLLYRQRMFQNFSVLTEKLAVSCQTKESVLLSWAYILERAPKS
VLNNEIKKVAPLVIDSLLFDNKDLLLVMTDVLSHFVKTKHMVIADSTQTILPRLLVLTKY
VKSMDVRINSLQCLFDIANTYPTQLVLPYKQDVLFDLAPSLDDKKRLVRNMSVKARTRWF
LIGAPGEPTPN
NT seq 2916 nt   +upstreamnt  +downstreamnt
atggtatctgtgtggcaaactcctgaactttctgacgaaattattaagggtgacgaaata
ttcgagagtacaacgtgcattgttgcggacattgtatctgcaaaaatagacataatgtgc
ctggtacaaaacatggccggtgtgctcacaagcaaagaggtagaatatcgggaaaaaggc
atgcgtttcttcaccaaagtattaaaggaattaccaaaagattacttaacacaaatgcaa
gtgaggttcatatcaaatttttacactgaccgcttaagagattatcatagggtcatacca
ccagttctagaaggatatttagctatatttgagatggagaactatgatatgcagaaaagt
ggcgagtttttgagagcattgttcagagaagtgccatgccagtcgcaagttagacaggat
aggctgaatatctacttgattataaagaaattactggagaaagatgttgaacatatgaaa
tcaatgggaccaaattttgcctatggcttcatatcagcaatggatggtgaaagagaccca
cgaaacttgttattcttatttgaattcataccaacattcttaaggcacataccactaggt
catttagttgatggaatgtttgaagtgatatcatgctactaccctatagattttcatcct
tcacctgatgatcctcaagcggtgtccaggcaagatttagcggatgagctgggtccttgt
ctgtgtgctatacccgagtttggagagcaatgcttgattctattgattgataaattggat
tcaaccctgcgcacagctaagatggattctttgaagttactggctctgagctgtaggaca
ttcaaagcagaagcatatggaccctttctgaaagcgctatggtcttctttgaacagggaa
atatctcacaaaacagatgacgaactcaaaatgtcagcgcatgaagctctatcaacacta
attgcaaaattggccacctctgccaatacagatcaagtgtttgagaatttcatcaaaggc
atactaatatccatgcagaccgcaatagcggagtcaacgacagtggctcagcttgtccaa
gctacaaaagtattgctgacaactgcaaatgcttcaaaagaatcctgtgtcattgtcact
aaagccatgatcccagccgcattagcttattatgaactcaatccgtctccgaaattacaa
attgctacactagactttttaggcgatctgaatgacatcactaaacattgggaggtaacg
gaacaaattgaaaaacaaatcatagaaataccccaactgtgtttgactgctgtgagccaa
ccgtctaaagaataccaaatagcaggcnttaaaaccctgattagagtgaaaagcgtgttg
cagtctgagcttgtgttgccttttgttgaagttttaatacataatatacagcacagtcaa
gagaatgatgtgctaagtgtgagtgttgaagcagtgcatgcaattgctagaaaatatcca
gagttaatcatgagctatgttgttaaaggtaaatgtgatttagacaatttgaccagagat
aaagatgcattgcaaaaacgtctgaacttactatctaatttggctagcattgatgacttc
acgaaagtaattattgaggaaatgttgaaagtaataacttcggatgatcaagacgcatct
aaagtagtcgaagcgcttagcgagtctatgtcaaatgcgagtttgtacacagttcaaaag
gtgactcagattgaaagtgattacggacttataaactccatattaacgtggctattaaag
gaattgtcatcaactaccaaagaatccctcacgcacggttttgcgttaatatctaacact
atgagcagtttgccggctgaaaaacagcaaatagtcctttcaaagcacatgcaatttgtt
ctagaaaaatctaaaacggaagagtcctatttcgtcgtcttagaatgcttgtacaactcg
ttacatgaaaccgtttacgagccaaactttcctgatattatgtctttgagtttacaatgg
gctctgctgagtgataatgatgaaataaggaataaagcttgtggtcttgtggctcatttc
ttgaataaagcaccttttggtgataagtttgatgcattgtatgaagtattgaagaaccat
ctgtcgtcttgcaacagggatgacgaacagttatgcccgaaggtgattatgctgtatgga
tggatagctaaagctttggtgctgaggggaagtgacatgttccatttttggttgcaaaag
ataatagctgtgttatcgcaccctaattataccaaactgggtgctaaagccatccatctc
atcatgacagacttcccagaccatctgaatgccaaatatcactgcagaatcagcttgttg
tacaggcagagaatgttccagaatttctcggtgctcacagaaaagctggcagtgtcatgt
cagacaaaagagagtgttctacttagctgggcgtatattcttgagagggcgcctaaaagt
gtacttaataatgaaattaagaaggtggcgcctctagtaatagattcgttattattcgac
aataaagatttgttgttagtcatgactgatgttttgtcgcacttcgttaaaacgaaacac
atggttattgcagacagtactcagactattttgcctcgattgttagtcttgactaaatac
gttaagtctatggatgtcagaataaatagcctccaatgtctattcgacatagcgaacacc
taccctacgcagttggtactaccgtacaagcaagacgtgctattcgatttagcgccatct
ctggacgacaagaagcgactggtacgcaacatgtctgtcaaagctcgcactcgctggttc
ctgattggtgctcccggagaaccaacaccgaattga

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