Choristoneura fumiferana (eastern spruce budworm): 141436421
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Entry
141436421 CDS
T11020
Symbol
RpS27A
Name
(RefSeq) ribosomal protein S27A
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03010
Ribosome
cfum04120
Ubiquitin mediated proteolysis
cfum04137
Mitophagy - animal
cfum04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
141436421 (RpS27A)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
141436421 (RpS27A)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
141436421 (RpS27A)
04137 Mitophagy - animal
141436421 (RpS27A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cfum03011
]
141436421 (RpS27A)
04121 Ubiquitin system [BR:
cfum04121
]
141436421 (RpS27A)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfum04147
]
141436421 (RpS27A)
Ribosome [BR:
cfum03011
]
Ribosomal proteins
Eukaryotes
Small subunit
141436421 (RpS27A)
Archaea
141436421 (RpS27A)
Ubiquitin system [BR:
cfum04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
141436421 (RpS27A)
Exosome [BR:
cfum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
141436421 (RpS27A)
Exosomal proteins of colorectal cancer cells
141436421 (RpS27A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Dsc3_N
TBK1_ULD
OTU1_UBXL
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
141436421
NCBI-ProteinID:
XP_073955508
LinkDB
All DBs
Position
16:996220..1002099
Genome browser
AA seq
155 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKNYSTPKKIKHKKKKVKLAVLRYYKVDENGKIHRLRRE
CTGEQCGAGVFMAVMEDRHYCGKCHSTMVFKDDDK
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaaaaccctcacgggtaaaaccattaccctcgaggtggagccctcg
gacaccatcgaaaatgtcaaagctaagatccaggacaaggagggcatccctccagaccag
cagaggttgatcttcgcgggcaagcagctggaggatggtcgtaccctctcagactacaac
atccagaaggagtcgacgctgcatttggtgctgcgtctgcgcggcggcgccaagaagcgc
aagaagaagaattactccacgcccaagaagatcaagcataagaagaagaaggtcaagctc
gctgtgctcagatactacaaggtcgacgagaacggcaagatccaccgtctccgtcgcgag
tgcacgggcgagcagtgcggcgccggcgtcttcatggcggtgatggaggatcgccattac
tgcggcaagtgccacagcaccatggtcttcaaggacgacgacaaatag
DBGET
integrated database retrieval system
