KEGG   Choristoneura fumiferana (eastern spruce budworm): 141436743
Entry
141436743         CDS       T11020                                 
Name
(RefSeq) lissencephaly-1 homolog
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
cfum  Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum00565  Ether lipid metabolism
cfum01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:cfum00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    141436743
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cfum03036]
    141436743
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cfum04147]
    141436743
Chromosome and associated proteins [BR:cfum03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    141436743
Exosome [BR:cfum04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   141436743
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C ANAPC4_WD40 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_Nup120_160 WD40_RFWD3 LisH_PAC1 Beta-prop_Vps41 Beta-prop_RIG_2nd Ge1_WD40 Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_WDR75_2nd Beta-prop_WDR19_1st Beta-prop_RIG_1st Beta-prop_DCAF12 Beta-prop_IP5PC_F LisH eIF2A Beta-prop_NWD2_C Beta-prop_SPT8 Nucleoporin_N Beta-prop_WDR11_2nd RMC1_N Beta-prop_WDR35_TULP_N PROPPIN Beta-prop_NUP159_NUP214 Pox_A_type_inc CALCOCO1
Other DBs
NCBI-GeneID: 141436743
NCBI-ProteinID: XP_073955870
LinkDB
Position
17:14731329..14767402
AA seq 411 aa
MKMVLSQRQREELNKAIADYLGSNGYTDALEAFKKEADMSGEMDRKFGGLLEKKWTSVIR
LQKKVMELESKLSEAQKEFIEGAPTRAKRTPAEWIPRPPEKFCLTGHRATITKVIFHPVF
SLMVSSSEDATIKVWDFESGEYERTLKGHTDSVQDIAFDHHGKLLASCSADMSIKLWEFN
QTFECVKTMHGHDHNVSSVAFSPSGDIVYSASRDKTIKAWEVATGYCINTYKGHREWVRM
VRVSPDGTLLASCSNDQTVRIWNAETKECKMELREHEHVVECVAWAPDAAAPAINEAAGG
DNRRAAHLGPFLASGSRDKSVKIWDVSTGQCLATLVGHDNWVRGAAWHPGGRYLLTASDD
KTLRVWDVPHTRCLKTLYAHQHFATSLDFHRSLPYVISGSVDQTVKVWECR
NT seq 1236 nt   +upstreamnt  +downstreamnt
atgaaaatggtgttgtcgcaacggcaacgagaggagctgaacaaagcgatcgccgactac
ctgggcagcaatggctacaccgacgcgctggaagcgttcaagaaggaagcagacatgtcg
ggcgaaatggatcgcaagttcggcggcctcctagagaagaaatggacttccgtcattagg
ctgcagaaaaaggtgatggaactggagtcgaagctgtcggaagcgcagaaagaatttatt
gagggtgcaccaacacgcgccaagcgcacgccggcagagtggatcccgcgcccgccagag
aagttctgccttaccggacaccgcgccaccattacaaaggtaatattccacccggtattc
agtttgatggtctcctcgagcgaggacgccaccatcaaagtgtgggacttcgagagcggc
gagtacgaacgaaccctgaagggacacaccgactccgttcaggacatcgctttcgaccat
cacggcaagctactcgcatcctgcagcgcagacatgtctataaaactgtgggaattcaac
caaacattcgagtgcgttaagacgatgcacggacacgaccacaacgtgtcgtcggtcgct
ttctcgccgagtggcgacatcgtctactcggcgagtcgcgataagaccatcaaggcttgg
gaagtcgctactggatactgcatcaacacttacaagggtcaccgcgagtgggtgcgcatg
gtgcgagtgtccccggacgggacgctgctcgcgtcctgctctaacgaccagactgtgcgt
atctggaacgcggagaccaaggagtgcaagatggagctccgcgagcatgagcacgtggtg
gagtgcgtggcgtgggcgccggacgcggccgcgcccgccatcaacgaggccgccggcggc
gacaaccgccgcgccgcgcacctcgggcccttcctcgctagcggctcgcgcgacaagtcc
gtcaagatctgggacgtgagcacggggcagtgtctggcgacgctggtggggcacgacaac
tgggtgcgcggcgcggcgtggcaccccggcggccgctacctgctcaccgcctccgacgac
aagactctgcgcgtgtgggacgtgccgcacacgcgctgtctcaaaacactctacgcgcac
caacacttcgccaccagtctcgatttccacaggagcttgccatacgtaatatcgggcagc
gtcgatcagaccgtcaaagtatgggagtgtcgctaa

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