Choristoneura fumiferana (eastern spruce budworm): 141436922
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Entry
141436922 CDS
T11020
Name
(RefSeq) mutS protein homolog 4-like isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfum03036
]
141436922
Chromosome and associated proteins [BR:
cfum03036
]
Eukaryotic type
Meiosis-specific proteins
Others
141436922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
141436922
NCBI-ProteinID:
XP_073956148
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Position
17:16467471..16476729
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AA seq
1199 aa
AA seq
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MNVVQRETINSNKINKKSKKDLVRKEFSWGIRGGTSLLPNKSTISNSGPRYQFINNNNNG
ESTSKPKISSMGPPLEPLKSLKRKLLQNSNSTKPESSSSGKARQPRVLASDSAAAESDFC
TPKNRPNALRYISSSSRGQLSGGYSGTRSARSSSTAVEPSVILAISEGRGMARGEIGMAA
IDLRHPNLVLCQFSDSLLYTHTMTKINYFNPIEIIVPNTFCEGVQPSQLYQLIRDQYPLL
NLTTVQRRHFNDAVGRQHIQTLCAPHYSPVFLQILDKFYALTAAAAVLKYVEYIQCVVFA
RESLKIEYHSSENTMIIGTFRIKVTNIKYLFTNGKGNTAVLFLIDVGTATQLELVQPLLP
SAGATCCLLGVLGPTYTVGGIRALRAAILQPSCKKEFIENRLDAVQDLIENESGLMIGLQ
DVVKKLSDIDRILLLCVEPQNQDMNKMGEAQLNQVLLLKTTLEMVPKLVEALKVANSGRL
QKMKMDFENPQFNEISERIKNIIQDDAHLEKGAMGSLQRCFAVKPDINGLLDVARRTYSE
LIDDIQKIVEHLGESYELPIRLNQNMMKGFHIVLTISPNNRRNFNVEELPPIFIQVQNNG
TRVSMTTEELVVLDQQAKESLNEIQKMSNIVIGSLLKDLRPFMSSLYKLCENVAELDILL
SIAQASTVGSYTRPDFSNHLDIRNSIHPLLDYNSQTMPVPNDIYASPEQNFTIITGPNMG
GKSIYIKQIAVLQIMAQVGCFLPATNAVLRICDRVFSRIGFNDSVELNASTYVIEMKEIQ
HILKGLTTSSLVIIDELCRGTSTEEGTSIAWAVCEDLLASDAFIFFTTHFMYLTRLQDLY
FNVVNLHTEVREEEMTNSPELQKRLVYEHKIKSGITNIKNYGLSLAAKTNLPSGTIQLAW
ELAELIDKNRNHQDTNSKFKSDNRLLYELNAAIRKESRRHPNNESFIRNIKIKFKEDNPQ
LIERLKVQRRRANNYIDTSDNNSSVSNTRQEPSNDGVINSRNSYSSSDQLNRIPLSINRS
QQRPIVYTDGDDKENRDLIHNLATTECRGVKSSTELLNTMMHLDNNNINQNPENTNDGDE
NEDNYFEEARNENFDNDEDDTANNTAFIDGSIIISDVHINEGGLRNDTNDPFTGSDSELA
EAMTQIIECSIQTKTKDDSEVSTDEELIKETVNDINMELESVTVSLEDLVLPPPLEFRD
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttgtgcaaagagaaacaataaattcaaataaaataaataaaaagtcaaagaaa
gacctagtgaggaaagaattttcttggggaattcgtggtggcacatcgttattgccaaat
aaatcaacaatttcgaatagtggtccgcgataccaattcatcaataataataataatggc
gaatctacgtcaaaaccgaaaatatcttctatggggcctccattggagcccctaaaaagt
ttgaagcgcaaattactccaaaactctaactctaccaagccggaatcatcatccagcggc
aaagcaaggcaaccaagagtattggctagcgattcagcagcagctgaatcagacttctgc
acacctaagaacagaccgaatgcattgagatacatcagcagcagtagcagaggtcaactt
tcaggtggatatagcggaactagatcagcccgatcatctagcaccgctgtggaacctagc
gttattttagctatatcagaaggcagaggtatggcacgtggtgagataggtatggcagca
attgacttaaggcatcccaatttagtgctttgtcaattcagcgactcgcttctgtacacg
cacactatgactaagataaattatttcaatcctatcgaaataatagttcccaacacattc
tgcgaaggcgtgcaacctagccagctttatcagctcataagagaccaatatcctttgtta
aacttgactacggtccaacgaagacactttaatgatgctgtaggtcgtcaacatatacag
acgttatgtgcaccccactacagccctgtgtttcttcagattcttgacaaattctatgca
ttaacagcagctgcagcagtacttaaatatgtggaatacatccaatgtgtagtttttgcg
agagaatccctgaaaatcgaatatcattcatcagagaatacaatgataattggtactttt
cgtataaaagttacaaatattaagtacttgtttacgaatggaaagggtaatacagctgtc
ttatttttgatagatgtaggaacagcaactcaactggaactggtgcaacctttgctacct
tcagcgggggcaacttgttgtctcctaggagtattaggtccaacttatacggttggtgga
atcagagctttgagggcagcaatactacagccgtcatgcaaaaaggagttcattgaaaat
aggctagatgctgttcaggatctaattgaaaatgaatctggattgatgataggattacag
gatgtggttaagaaattatcagacatcgacagaatattgttactatgtgttgagccacaa
aaccaagacatgaacaagatgggtgaggcccagttgaatcaggtactactactaaaaacc
actttggaaatggtaccaaagcttgttgaagcactgaaagtagctaacagcgggagactt
caaaaaatgaaaatggacttcgaaaacccccaattcaatgaaatatctgaacggataaaa
aatataatccaagatgacgctcatctagagaagggtgccatgggaagtctccagaggtgt
tttgctgtaaagcccgatataaatggactattagatgtggctcggaggacttactctgaa
cttatcgatgacattcagaagatagtagagcatttgggggaatcgtacgaattgccgata
agactaaatcaaaacatgatgaaagggttccatattgtactaacaatttctccaaataat
cgaagaaatttcaacgttgaagagctacctccaatctttatacaggtacaaaataatggt
acgagagtttcaatgacaacagaagaattagttgttcttgatcagcaggctaaggagtct
ttgaatgaaattcagaaaatgagcaatattgtgattggaagtcttttaaaggacctgcga
ccattcatgtctagtctgtacaaactttgtgagaacgttgccgaattagacattctactg
tccatagctcaagctagcacagtagggtcatacacacgaccagatttcagcaaccacctc
gatatacgcaatagtattcacccacttttggactacaatagccaaaccatgccagtccct
aatgatatttatgccagcccagagcaaaacttcacaataataaccggcccgaatatgggt
ggcaaaagcatctacataaaacaaattgctgtattgcaaattatggcgcaggttgggtgt
ttcctgccagcaacaaatgctgttctcagaatttgtgaccgtgtcttctcacgaataggc
tttaacgatagtgttgagttgaatgcctctacttatgtcattgagatgaaagaaatacag
catattttgaaaggtttgactacatcaagcttggtaataatagacgaactttgtagggga
acgtcaacagaagaaggaactagtatagcttgggcagtatgtgaagacctacttgcaagt
gatgcttttatctttttcacaacgcatttcatgtatttgacgagactgcaggacttatat
tttaatgtcgtcaatttgcacactgaagtcagagaagaagaaatgacaaattcgccagaa
ctgcaaaagcgacttgtctatgaacataaaattaaatcaggaattacgaatataaagaac
tatggtttgtcgttagcagcgaaaacaaatttgccatcaggaacaattcaacttgcatgg
gaattagctgaattaatcgataaaaacagaaatcaccaggatacaaactctaaatttaaa
agtgataacagattactttatgaactcaacgctgcaataagaaaagaatcaaggagacac
ccaaataacgaaagttttataaggaacataaagatcaaattcaaagaagataatcctcaa
ttaatagagagactcaaggtacaacgacgcagagcaaataactatattgacacaagtgat
aataattcgtccgtgtctaatactagacaagaaccttcgaacgatggagtaataaattct
aggaattcgtattcatctagtgatcagcttaatcgaataccactatcaatcaacagatct
caacaaagacccatagtatacaccgatggagatgataaagaaaatagagatttaatacac
aatctcgctactacagaatgtcgaggtgttaaatcctcgactgagcttttaaatactatg
atgcatcttgacaataataacattaatcaaaatccagaaaatacaaatgatggcgatgaa
aatgaagataactatttcgaagaagcaagaaatgaaaactttgataacgatgaggatgac
actgctaataatacggccttcattgatggctcgataatcatttctgatgtacatattaac
gaaggtggtttgaggaatgatactaatgatccttttactggctcggactcggagcttgcc
gaagctatgactcaaatcattgaatgttccatacaaaccaaaacaaaagacgatagtgag
gtatcaacagatgaagaattaatcaaagaaacagtgaatgatattaacatggagttagag
agtgtaactgttagtttagaagacttggttcttccacctccactggaatttagagattaa
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