Choristoneura fumiferana (eastern spruce budworm): 141437040
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Entry
141437040 CDS
T11020
Symbol
Mdr50
Name
(RefSeq) multi drug resistance 50
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
141437040 (Mdr50)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfum02000
]
141437040 (Mdr50)
04147 Exosome [BR:
cfum04147
]
141437040 (Mdr50)
04090 CD molecules [BR:
cfum04090
]
141437040 (Mdr50)
Enzymes [BR:
cfum01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
141437040 (Mdr50)
Transporters [BR:
cfum02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
141437040 (Mdr50)
Exosome [BR:
cfum04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
141437040 (Mdr50)
CD molecules [BR:
cfum04090
]
Proteins
141437040 (Mdr50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
RsgA_GTPase
AAA_16
AAA_28
Rad17
AAA_22
AAA_29
Zeta_toxin
AAA_21
AAA_7
ATP-synt_ab
nSTAND3
AAA_18
AAA_30
NB-ARC
AAA_25
nSTAND1
Motif
Other DBs
NCBI-GeneID:
141437040
NCBI-ProteinID:
XP_073956328
LinkDB
All DBs
Position
17:complement(15017124..15050680)
Genome browser
AA seq
1266 aa
AA seq
DB search
MKRSGTYKLGDDTKPKNKQKTDLSNVQFTNGKAATDKDDVSEAEIKEEVPSISFFTLYRF
ATTKDKVFIFLALICSILAGTTTPFNTLLFASLLQSMVDYGISVILEMPNDDAFLIAIRD
FAIYNCILGVALVVLSYLATVLMNISAFNQVFRIRQEYLKSALNQDFEYFDMHQTGDFAA
KMSNDVVKVEDGIGEKLATFIFYQSAFVSSVTMALIKGWKLALLCLISFPVTLALVGIAG
LVASRLSKKEAKASGKAGSVTEEVISAIRTVYAFSGQQKEIDRYKVHLKDARIINIKKGL
FNGIAMGTLFFCIFCAYALSFWFGYQLLSDPNENYDVETMIAVFFGVMMGSANFGISSTL
MEVFGVAKGAGAQIFHVIDNVPTINPLLNRGVTPTSAEGNIELKNIIFHYPSRPDVPVLK
GVNLTVKRGQSVALVGHSGCGKSTIIQLISRYYDVIDGSVRVDGHDVRELSVRWLRAQVG
LVGQEPVLFNTSVRENIRYGREDASDADIEAAARQANAHQFILKLPKGYETLVGERGASL
SGGQKQRIAIARALVRNPSILLLDEATSALDTASEAKVQKALDKAQEGRTTIVVAHRLTT
IRNVDMIYVFKSGLVVETGNHEELMKKKGHYYDMVMLQTFPGSESETDTKRPSLTREISV
RSEKDEDDFIPMNTEDPEDAAKVPEVSFWQVLKLNKPEWKSVTAASICSIMVGFSMPLLA
VVLGDFVGVLSNPNADEVLAEVQRFALIFVGIGVFSGIGNFIQVFFYGVAGEHLTERLRY
DLFTKLLEQEIGFYDDKENSTGALCARLSGEAASVQGATGQRIGTVLSAFGTFGFALALS
LIYEWRVGLVALAFVPIMVAILYKEGRMVSAQSFGAAKTMESSSKIAVEAVANVRTVASL
GREENFVKDYSVQLEPGLVLAKKATHWRGIVFGLSRGLFNFIYAAAMYYGGTLIVYDQVD
YAVVLKSSQALLMGASSAAQAFAFAPNFQKGIKAAGRIILLLNRQSKITDPAHPVIRDFK
GSGESSLQGVNFKYPTRPMIQVLNNLNLEIQKGKTVALVGASGCGKSTVIQLLQRYYDPD
EGIVAQDGIPITKLRLDDTRGTIGFVQQEPILFDRTIGENIAYGDNSRNPSQDEIEAAAK
QANIHNFITSLPLGYDTNIGSKGTQLSGGQKQRVAIARALIRRPQMLLLDEATSALDTES
EKVVQEALDAAKAGRTCVMIAHRLSTVRDADLICVVHNGRVAEHGTHQQLMDLKKLYYNL
NRRGYS
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggtccgggacctacaaactcggtgatgacaccaaaccaaagaacaaacagaag
acggacctctcaaacgtacagtttacaaatggcaaagccgcaaccgataaagacgatgta
tctgaagctgaaatcaaagaggaagtaccgagcatatctttcttcacattgtacagattt
gctaccacgaaagacaaagtgttcatcttcctggcgctgatatgctcgatactggctgga
acaactactccgttcaacactttgctttttgcgtcgttattgcaaagtatggtagactac
ggtatttccgtaatattggaaatgccaaatgacgacgcctttttaatagcaattagagac
tttgctatatacaattgcatattgggagtcgctcttgtagttttatcctaccttgcaacg
gttttaatgaacatatcggcttttaatcaggtgttcagaataaggcaagaatatttgaaa
tcggcattgaatcaagactttgaatattttgatatgcatcaaacaggggattttgctgca
aaaatgtccaatgatgtagtgaaagtcgaagatggtattggagagaaattagccaccttt
atattttaccaatcggcgttcgtcagttctgttaccatggctctaattaaaggatggaag
ctagctttgctttgtttaatatcgttccccgtaactttggctctcgtcggaattgctgga
ttggtagcttccagattatccaaaaaagaagctaaagcgtctggtaaagcaggatccgtt
acggaagaagttatcagtgcaatacgcactgtttatgcatttagtggacaacaaaaagaa
atagatagatataaagtgcatttaaaggacgcgagaataataaatattaagaaaggatta
ttcaacggaatagcgatgggaactcttttcttctgcattttttgtgcatatgccctatcg
ttttggtttggttatcaactcctttcggatccaaatgaaaactatgacgtggaaactatg
attgccgtattctttggtgtcatgatgggttcagccaattttggtatatcatcaactttg
atggaagtgtttggagtagctaaaggtgcgggcgcgcaaattttccacgttattgacaat
gtgcccacaatcaacccacttctaaaccgcggcgtcacgccgacttccgcagaaggcaac
attgagttgaaaaacatcatcttccactatccttctagacctgacgtgccggtgctcaaa
ggtgttaacctcaccgtgaagagagggcaatcagtggcgctcgttggacattccggatgc
ggcaagtctaccatcatacagctcatatccagatactatgacgtcatcgatggcagtgtg
cgagtggacggtcacgacgtgcgcgagctgtcggtgcgctggctgcgcgcgcaggtgggg
ctggtggggcaggagccggtgctgttcaacaccagcgtgcgcgagaacatccgctacggc
cgcgaggacgcctccgacgccgacatcgaggcggccgcgcgacaagccaacgcgcaccaa
ttcattctcaaacttcctaagggctacgaaacgttagtgggcgagcgcggcgcgtcgctg
tcgggcggacagaagcagcgcatcgccatcgcgcgcgcgctcgtgcgtaaccccagcatc
ctgctgctggacgaggccaccagtgcactcgacaccgcctccgaagccaaagtgcaaaaa
gcgcttgataaggcacaagaaggaagaacaacaatcgtcgtagcacacagacttacaaca
attagaaacgtggatatgatttacgttttcaagagtggcttagttgtagagactggtaat
catgaggagcttatgaaaaagaaaggtcattactatgatatggttatgctgcaaacattc
ccgggatcggaaagtgaaacagataccaagcggccatcgttaacccgcgaaatatccgta
aggagtgaaaaggacgaagatgacttcattccgatgaatacagaggacccagaggatgcg
gcgaaagtgccagaagtctccttctggcaagttctgaaacttaacaaaccagaatggaag
tctgtgaccgccgcaagtatctgctctatcatggtcggcttttcgatgccgttgcttgct
gttgtcttaggagattttgtcggagttctttctaatccaaatgcagatgaagttttggca
gaagtccaacgatttgcgcttatctttgtaggcataggagttttttcaggaatcggaaat
ttcattcaggtatttttctatggagtggctggtgaacatttgacagaacggctgaggtac
gatctatttacaaagctactggaacaagagattggtttctacgatgacaaggaaaactct
actggcgctctctgcgctcgcctttcaggcgaggcagcttcagtgcaaggggctaccggc
caacgtattggcactgtcctgtctgcattcggcacttttgggttcgctttagccctatct
ctcatctacgaatggagagtaggattagttgcgttagcttttgtgcctatcatggtggcc
attctctacaaggaagggagaatggttagcgctcaatcatttggagcggcaaaaaccatg
gaatccagttccaagatagcagtagaggcggtagcaaacgttcgtacagtcgcatccctt
ggtagagaagagaactttgttaaggattatagtgtccaacttgagccgggattggttctg
gctaagaaagcaacgcactggcgtggaattgtttttggtctctcacgtggactattcaat
ttcatttatgcagcagctatgtactacggaggaactctcatcgtttacgaccaagtcgac
tatgcagttgttctaaaatcgtcacaagcattgttaatgggagcctcttctgctgcacaa
gctttcgcatttgctccgaatttccaaaagggaattaaagctgcaggccgaattatttta
ctgctcaataggcaatcgaaaattacggatcctgctcatcctgttatcagagatttcaaa
ggttcaggcgaatcaagcttgcaaggagtcaacttcaaataccccacgcggcccatgata
caagttctcaataatttgaatcttgaaatacaaaagggtaaaacagttgctctagttggt
gcgagtgggtgtggaaagagtactgtcatacagcttctccaaagatattatgatcctgat
gagggcatagtggcacaagatggcatacccataacaaaacttcgtcttgacgacaccagg
ggaaccattggttttgtacagcaagaacctatattgtttgaccgtacgattggcgaaaac
attgcttacggggataattctcgaaacccaagccaagatgaaatcgaagctgctgcaaaa
caagccaatattcacaattttattacttcgttgcctttgggttatgacaccaatattggt
tcaaaaggcacacagttatctggtggacagaagcagcgagtggccatcgcaagggcatta
atacggcggccacaaatgctcttgctagatgaagcaactagtgctctcgacactgagagt
gaaaaggtggtgcaggaggcgttggacgcggcgaaggcgggccgcacgtgcgtgatgatc
gcgcatcgcctgagcaccgtgcgcgacgccgacctcatctgcgtcgtgcacaacggacgc
gtcgccgagcacggcacgcaccaacaacttatggacctcaagaaactttactacaatttg
aaccgaagaggatattcataa
DBGET
integrated database retrieval system
