Choristoneura fumiferana (eastern spruce budworm): 141437064
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Entry
141437064 CDS
T11020
Symbol
SMC1
Name
(RefSeq) structural maintenance of chromosomes 1
KO
K06636
structural maintenance of chromosome 1
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfum03036
]
141437064 (SMC1)
Chromosome and associated proteins [BR:
cfum03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
141437064 (SMC1)
Meiosis-specific proteins
Cohesin complex and associated proteins
141437064 (SMC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_23
AAA_21
AAA_29
AAA_13
DUF1664
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
141437064
NCBI-ProteinID:
XP_073956370
LinkDB
All DBs
Position
17:complement(20580471..20614416)
Genome browser
AA seq
1220 aa
AA seq
DB search
MPAFLKYIDMENFKSYRGQHRIGPLKSFTAVVGPNGSGKSNFMDAVSFVMGEKTSLLRVK
RLSDLIHGASINKPVSRNASVTATFILEDMTEKQFQRSVIGQSSDHKIDGQSVSVSNYLA
ELERLGINVKAKNFLVFQGAVESIAMKNPKERTALFEEISGSGVLKEQYEACRAEVNRAD
EEAQFSYQKKKGVAAERKEAKFEKEEAEKYTRLKEELQEQKVELQLFHLYHNEKEIQNLE
ETLQHKQTELTKIEKKRQKAEDGLKEKKKESGTIQRELAKIEQDIREVEAEISKKRPTFI
KAKERVSHTQKKLESASKTLEQARKAHEAHQADLRKLEAELRAAEQQRQTWETAALGQPA
ARADVHLEEAQIREYEELKMEASRQAARYLQELDSVNREQKADQDRLDNELRRKGDLENK
HRQKGHERNEAMKRVEKLNEHIRSSEQALDEQRRLRAELQADVGSCRSRADELQAALEEV
AAQLGDARVDKHEEARRRKKQEIVENFKREIPGVYDRMINMCQPTHKRYNVAITKVLGKY
MEAIVVDTEKTARRCIQVLKERMLEPETFLPLDYIQAKPLRERLRDIREPKNVKLLFDVL
RFEPAAIHRAVLFVTNNALVCETPEDASRVAYDLDRSKNSRYDALALDGTFYQKSGIISG
GSLDLARKAKRWDEKHLSQLKAKKEKLTEELRESMKKSRKESELTTVDSQIRGLEARLKY
AQTDRDTTLKQIKQLDAELAELERAMETFGPQIEEIERTISSRDARIQEVKENMNNVEDV
VFRRFCRDIGVANIRQYEERELRAQQERAKRRMEFDAQIDRIASNLEFERSRDTQKNVTR
WERTVQDGEDELEAGRQAEAKQRADVDRELQRAEGLKGERSAARARHDQAEEGVAKARKD
LTSIQKDIQSIQKQIASTESRIESKRSDRHNILRQCKIDDIVIPLLEGSLEELGENESDP
SSLSTTQQYNRDASIRVNYRSLSEALKELEEPDEVKRKADKLQKAINTLQATVDKIQAPN
MRAMQKLNEVREKVNATNEAFVAARKRAHKAKLAFEKVKKERHDKFMDCFEHVANEIDAI
YKALAMNQSAQAFLGPENPEEPYLDGVNYNCVAPGKRFQPMSNLSGGEKTVAALALLFAI
HSYQPAPFFLLDEIDAALDNTNIGKVASYIRSKKGNLQTIVISLKEEFYGCADALVGICS
EPADCLVSDVITLSLEKYED
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcatttctcaaatatatagatatggagaatttcaagtcctatcggggccagcac
cggataggacctctgaaatctttcacagccgtcgttggtcccaatggctcaggcaagtct
aacttcatggacgccgtgagtttcgtgatgggtgagaagacgtcgttgctccgtgttaaa
cggttgagtgacctcattcacggtgcctccatcaacaaacccgtgtctaggaatgcatcg
gtaactgcaacatttatactggaggacatgacagagaagcagttccagaggtctgttatt
ggacaatcctcagatcacaagatagatggtcagtcagtatcagtgagcaactacctggca
gagctggagcgcctcggcatcaatgtaaaggccaagaacttcctggtcttccagggtgcc
gtcgagagcatcgccatgaagaatcctaaagagaggacggcactctttgaagagatcagt
gggtcgggtgtgctgaaagagcagtacgaggcctgccgcgccgaagtaaaccgcgccgac
gaggaggcgcagttcagctaccagaagaagaagggcgttgctgctgagcggaaggaggcc
aagttcgagaaggaggaggctgagaagtacacccgcctcaaagaggagctgcaagaacaa
aaggtggaacttcagctgttccacctgtaccacaatgagaaagagatccagaacctggaa
gagaccttgcagcacaagcagacggagctgaccaagatagagaagaagcggcagaaggcc
gaagacgggctcaaagagaagaagaaagagtccggcaccattcagcgggagctggctaag
atcgagcaggatattagggaagttgaagcggagatatccaagaagcgtccgacgttcata
aaggcgaaagagcgcgtgtcgcacacgcagaagaagctggagagcgcttccaagactttg
gaacaggcgcgcaaagcacatgaggcgcaccaggcagacctgcgcaaactggaggcagag
ctgcgcgccgccgaacagcaacgccagacctgggagaccgccgcgctcggacagcccgcc
gccagggccgacgtgcatctggaggaggcgcagatccgcgaatacgaggagctgaagatg
gaggcgtcccgtcaggcggcgcgctacctccaggagctggacagcgtcaaccgcgaacag
aaggccgaccaggaccgcctcgacaacgagctgcgccgcaagggagacctcgagaacaaa
caccggcaaaagggccacgaacgtaacgaggcgatgaagcgcgttgagaaactcaacgag
cacatccgcagctccgagcaggcgctcgacgagcagcggcggctgcgcgcagagttgcag
gcggacgtggggtcgtgccgcagccgcgcggacgagctgcaggccgcgctggaggaggtc
gcggcgcagctgggcgacgcgcgcgtcgacaagcacgaggaggcgcgccgccgcaagaag
caggagatcgtcgagaacttcaagcgggagatacccggcgtgtacgatcgcatgatcaac
atgtgccagccgacgcacaagcgctataacgtggcgatcaccaaagtgctgggcaaatac
atggaggccatagtggtcgatacggagaagacggcgcgtcggtgcatccaggtgttaaaa
gagcgtatgttggagcccgaaacgttcctcccgctggactacattcaggccaaacctctc
cgcgagaggctacgcgacatccgcgagcccaagaacgtgaagctcctgttcgacgtgctg
cgcttcgagccggccgccatccaccgcgcggtgctcttcgtaaccaacaacgcgctggtc
tgcgagacgcccgaggacgcctcgcgcgtcgcctacgacctggaccgcagcaaaaacagt
cgctacgacgctttggcgctggacggcacgttctaccagaagtcgggcatcatctctggc
gggtcgctggacctggcgcgcaaggccaagcgctgggacgaaaaacacctgtcgcagctc
aaggccaagaaggaaaagctcacggaagagctgcgcgagagcatgaagaagtcgcgcaaa
gagtccgagctcaccaccgtcgactcgcagatacgcggccttgaggcccggcttaagtac
gcgcagaccgaccgcgacaccacgctaaaacaaatcaaacagctcgacgccgagctcgcc
gagctggagcgcgccatggaaactttcggacctcagatcgaagagatcgagcgcacgatc
agctcccgcgacgcgcgcatccaggaggtcaaggaaaacatgaacaacgtggaggatgtg
gtgttccgccgcttctgccgcgacatcggcgtcgccaacatacggcagtacgaggagcgc
gagctgcgcgcgcagcaggagcgcgccaagcggcgcatggagttcgacgcgcagatcgac
cgcatcgcgtccaatctagagttcgagcgctcgcgcgacactcagaagaacgtgacccgc
tgggagcgcacggtgcaggacggcgaggacgaactggaggcggggcggcaggcggaggcc
aaacagcgcgctgacgtggaccgggagctgcagcgcgctgaggggctcaagggggagcgc
agcgccgcgcgcgcgcgacacgaccaggccgaggagggcgtcgccaaggctcgtaaggac
ctcacgtcgatccagaaggacatccagagcatccagaagcagattgccagcaccgagtcg
cggatcgagagcaaacgcagcgaccgacacaacatactgcgccagtgcaagatcgacgac
atcgtgattcctctgctggagggcagcctggaggagctgggagagaacgagtccgacccc
tcctcgctctccaccacgcagcagtacaacagggacgccagtatccgggtgaactaccgg
tcgctctcggaggcactaaaggagctggaggagccggacgaagtgaagcgcaaggccgac
aagctgcagaaagccatcaacaccctgcaggccaccgtcgacaagatacaggcgcccaac
atgagggcgatgcaaaagctgaacgaggtgcgcgagaaagtgaacgccaccaacgaggcg
ttcgttgcggctcggaagcgcgcgcacaaggccaagctcgccttcgaaaaggtgaagaaa
gagcgtcacgacaaattcatggactgtttcgagcacgtggcgaatgaaatcgatgccatt
tacaaggcgctggcgatgaaccagtcggcgcaggcgttcctgggccccgagaaccccgag
gagccgtacctggacggcgtgaactacaactgcgtggcgcccggcaagcgcttccagccc
atgtccaacctgtccggcggggagaagaccgtcgccgcgctcgcgctgctcttcgctata
cacagctaccagccggccccattcttcctgctggacgagatcgacgcggcgctagataac
accaacatcggcaaagtagcctcctacatccgcagcaagaagggcaacctccagaccatc
gtcatcagcctcaaggaggagttctacggctgcgcggatgcactcgtcggcatatgctcg
gagcctgcggactgcttagtgagcgacgtgattacactgagcctcgagaaatatgaagac
tag
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integrated database retrieval system
