Choristoneura fumiferana (eastern spruce budworm): 141437128
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Entry
141437128 CDS
T11020
Symbol
TrpA1
Name
(RefSeq) transient receptor potential cation channel A1 isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cfum04040
]
141437128 (TrpA1)
Ion channels [BR:
cfum04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
141437128 (TrpA1)
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
141437128
NCBI-ProteinID:
XP_073956492
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Position
Z:41457433..41483019
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AA seq
940 aa
AA seq
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MEVFLQWGESLGCTREQMISLYDNEGNVPLHSAVHGGDIKAVKLCLSSGAKISTQQHDLS
TPVHLACAQGALEIVKLMFTMQPKEKLACLTSCDVQKMTPLHCAAMFDHPEIVDYLVSEG
SDINPLDKERRSPLLLAASRAGWRTVHTLIRLGADIRLKDINSRNVLHLVVMNGGRLEDF
AANCKDRCEKSLAELLNEKDMTGCSPLHYASREGHIRSLENLIRLGACINLKNNNNESPL
HFAARYGRYHTACQLLDSDKGTFIINESDGEGLTPLHISSREGHTRVVQLLLNRGALLHR
DHNGRNPLHLAAMSGYTQTIELLHSVHSHLLDQVDKDGNTPLHLATMENKPNSIALLLSM
GCRLIYNNLDMSAIDYAIYYKFPEAALAMVTHEQRAHEVMALRSDRHPCVTLALIAYMPR
VFEAVQDKCITKANCKKDSKSFYIKYNFEALCPVLVDDETKKQETVKTQTVPLPALNAMV
AHGRVELLAHPLSQKYLQMKWHSYGKYFHLANLLFYSIFLTFVTVYSYLLMTHTDPSYAA
LEKPSNNCITSNISDNNETALNHTEPASKKADFHANFESLVAMYTSTVAILIYNALSLIR
EAVNMKDQKWHYIVDPSNLMSWVLYFSSTIMVFPTIFGTYYDIQFSAASITVFLSWFELL
LLLQRFDQVGIYVVMFLEILQTLIKVLMVFSILIIAFGLAFFILLSKGHHLSFNSIPMSL
MRTFAMMLGEIDFVGTYVQPFYESETERALPFPMPTFIILSTFMVLMPILLMNLLIGLAV
GDIESVRRNAQLKRLAMQVVLHTELERKLPAILLEKVDKNELIEYPNNKKCKLGFLDFIL
RKWFCNPFTDDAGLDLVLESSEDYISAELDKQKRRLREMSQLLEQQHTLIRLVVQKMEIK
TEADDVDEGVSPGDTRVVPRWSSPRIRKKLRTAQSFNKSA
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgttcctccaatggggagagtccctaggatgtaccagggagcagatgatatcc
ttatatgacaacgaaggaaacgtaccattacattcagcggtacatggtggggacatcaaa
gctgtcaagttgtgtctcagttctggagcgaagatatctacgcagcagcatgatttgtca
acacctgtgcatctggcatgtgcgcagggtgccttggaaattgttaaactgatgttcacg
atgcagccgaaagagaaacttgcttgtttgacgtcctgtgacgttcagaaaatgacacct
ctccactgtgcagccatgtttgatcacccagaaatagttgactacctggtgtctgaagga
tcagatataaaccctttggataaggagagaagatctcctttgctgcttgctgcttctaga
gcaggatggaggactgttcataccttgatccgtcttggagctgacattcgcctgaaagac
atcaattcgcgaaatgttctgcatctagtggtgatgaatggaggaagactagaagacttt
gcagctaattgtaaagaccgctgcgagaagagtttggctgaacttcttaatgagaaagac
atgactggatgctccccgctccactacgctagtcgggaaggccacatcaggtctctggag
aacctgatcagattaggtgcctgcatcaacctgaagaacaacaacaatgaaagtcctttg
cattttgctgctagatacggccgctaccacaccgcttgccaactcttggactcagataag
ggtacttttatcatcaacgagagcgatggggaaggtctcacccccctccatatctcctcg
cgcgaaggtcacactagggtcgttcagcttctgctgaacaggggtgcactgttgcacagg
gatcacaatggcaggaacccactacacttggctgccatgagtggctacacacaaaccatc
gagctactacattcagtgcactctcatttgctggaccaagttgataaagacgggaacact
cctcttcatctagctacaatggaaaacaagcctaactctatagcgctgctcctgtctatg
ggctgccgactgatctacaataacttagacatgagtgcaattgactacgccatctattac
aagtttccggaagctgctttggccatggttactcatgaacagagagctcacgaggtgatg
gccttgaggtcagaccggcatccctgcgtgactcttgctctgatagcctacatgcctcgc
gtcttcgaagcggtccaggataagtgcatcaccaaggccaattgcaagaaggactctaaa
agtttctacatcaagtacaacttcgaggcactatgccccgtccttgtcgacgacgagaca
aagaagcaggagaccgttaaaacgcagacggtaccactgccagccctgaatgcaatggta
gcccacgggagagtagagctactggctcatcctctgagccaaaaatatcttcaaatgaaa
tggcactcctacgggaagtatttccatttggcgaacttacttttctacagcattttccta
acttttgtgacggtgtactcgtatctactgatgacacatactgatccaagttacgctgct
ctggagaaaccatcgaataattgcataacgtctaatatttctgacaataatgagaccgca
ctgaatcacaccgagcctgcaagtaaaaaagctgattttcatgcaaatttcgagtcactg
gtagcaatgtacacaagtacagttgccatattgatctacaatgcactatcgctcattcgc
gaagctgtgaatatgaaggaccagaaatggcactacatagtcgacccctcaaacctcatg
tcctgggttctatacttcagctccactatcatggtcttccctacgatatttggaacgtac
tacgacatacagttctccgcagcatcgatcacagtgtttctgtcctggttcgagctgctc
cttcttctccagcgtttcgaccaagtcggcatctatgtggtgatgttcctcgagattctc
cagaccctcatcaaagtgttgatggtcttctccatcctgattatcgcctttggacttgcc
ttcttcattctgctgtctaaaggtcaccacttgtcttttaacagcatacctatgtcccta
atgagaacttttgccatgatgcttggagaaatagacttcgttggaacttacgtgcagcct
ttctacgagtcagagacggaacgggctttaccattcccaatgcctacttttataatacta
agtacctttatggtgctgatgccgattttattgatgaacttgcttatcggtttggctgtt
ggtgacatcgagagtgtaaggaggaacgcacaactaaaacggctagctatgcaggtggtg
ctacacactgaattggagcgcaagctaccagcaatcctattggaaaaggtcgataaaaat
gaactgatcgagtatcccaacaacaagaaatgcaaactcggttttcttgattttatatta
cgcaaatggttctgcaatcccttcactgatgacgctggtctggacctggtcttggaaagc
agtgaagactacatcagtgctgagttggacaagcagaagcggcggctccgagagatgtca
cagcttctggagcagcaacacaccctcattaggcttgttgtgcagaaaatggagatcaaa
actgaggcagacgacgtggacgaaggcgtgtcacccggagatacccgagtggtcccgagg
tggagttcaccccgaatcaggaagaaattgcgaacagcgcaatcattcaacaagagtgct
taa
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