Choristoneura fumiferana (eastern spruce budworm): 141437382
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Entry
141437382 CDS
T11020
Name
(RefSeq) integrin alpha-PS1-like isoform X1
KO
K06583
integrin alpha 7
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum04512
ECM-receptor interaction
cfum04518
Integrin signaling
cfum04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141437382
04518 Integrin signaling
141437382
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
141437382
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfum04147
]
141437382
04515 Cell adhesion molecules [BR:
cfum04515
]
141437382
Exosome [BR:
cfum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
141437382
Cell adhesion molecules [BR:
cfum04515
]
Integrins
Integrin alpha subunits
141437382
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP_3
Integrin_alpha
LYRIC
Collectrin
Motif
Other DBs
NCBI-GeneID:
141437382
NCBI-ProteinID:
XP_073956800
LinkDB
All DBs
Position
17:13566881..13637806
Genome browser
AA seq
1122 aa
AA seq
DB search
MAYKMKCESVVFLCILYSATSFNLEPRIPVIKFGEDGSYFGFSVAEHLTTNEIGNNTSWL
LVGAPLGQNLQPNTSRSGALWKCPLRPAVDDCEQIATDGKRTKYGNIDKTVDSSHLSPPL
PDEIKNGQWLGVSVRSQGPGMKAVVCAHRYIRKSGESQFGQGLCYTLSNDLQLADVWEPC
RGKPTAREHEEYGFCQVGVSSSLLKDDTLLLGSPGPYAWRGTIFTHDVQDSLLDRDSIAY
MAPVVDGVSPVEKYSYLGMSVAGASFFDETPSYAAGAPRSRGTGQVVIFSKRIIKDWSSS
DFYILNFTLLLNGEQFGSSFGYEVASADVNGDGLPDLLIGAPFYFSKENGGAVYLYLNDK
RHFSQKYNKRLTGKPESQFGISIANAGDLNKDGCEDVAIGSPYEDNGVVYIHLGNRKNGL
HTKADQVIRAESLPNTMKTFGYSLSGGTDLDANGYPDLLVGAYENSSVALLRTRPIIDIK
TSIRPSKTIINIDPSVQGCEKDPTANNTCFHFQACCIIKSLVNTAQNIIHNINYVIEAET
FPGGRKFSRVFFDSEKVNIVNKTIQLGRNSEACREHIVYLKNNTRDIKTPLKFQVTYKIV
HDEPKYITTGTLPNIDDYPVLNATATTTFTANFLNDCGADGVCTSDLVVQPVLQLPKAKN
GKSYTLTLGQEDEIKLDITVDNYGESAYESQLFVQHNASLHYIAANISDKHVICTSVNKT
IVSCMLENPFKNQNGAATPITMRFDARALEDNEPSVVFSAWANSTSVELYPNKTPATVEA
LVVKNAELLIKGAARPEQVFYGGEVKGESAMEYFDDIGTRVVHTYQVYNEGPWRVSSLQV
VISWPHQVASENEQGKWLLYPEDVPTVDGEADQSNGECFISETEINSLKLTKRPGVAEPH
LENLEMDPFLTTGKLSVSSIEKHNETSYKNVIQYSSASENKVRRKRENDIIKAEAYTDKD
GHRKNVVNMNCHNKTAKCIQFQCVIYRLGRMQATTITIKARLWNATLVEDYPRVSHVNIA
SSAYILIPEHYNIHQNKHHDDMATVETVAYPDLNISEPTEVPLWVIIVSVIVGLIVLILL
IIALWKLGFFKRSRPDPTLSGNLEKNNHESSPFIGRDRNSKR
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggcttataaaatgaagtgcgagagtgttgtatttttgtgcattctgtatagtgccacc
agtttcaatctggagccgaggattcctgtgataaaatttggagaagatggctcttacttt
ggattttctgttgcggaacatcttaccaccaacgagattggcaacaatacgagctggttg
ctggtaggcgcacctttaggccagaatcttcagccaaacacatccagatcgggagctctt
tggaagtgtccgcttaggccagccgtcgacgactgtgagcaaatcgccactgacggcaaa
cgaacgaagtacggcaacatagacaagaccgtggactcctcgcacctatcgccgccactg
cccgacgaaatcaaaaacggacaatggctcggagtctcagtgcggagccagggacctggg
atgaaggccgtcgtctgtgcgcacaggtacattcgaaaatctggagagtcacagttcggc
caaggactatgttacacgctcagcaacgacctgcagctcgcagacgtctgggagccatgc
cgcgggaaacccacggcaagggaacacgaagaatatggtttctgccaagtaggagtaagc
agttctcttctgaaagacgacactttgctactgggtagccccgggccctacgcttggaga
ggcaccattttcacccatgatgtccaggacagcttgctagaccgagacagcatcgcctat
atggcacctgtagtagatggagtcagtcctgttgaaaaatacagctacttaggtatgtca
gtagcgggtgctagttttttcgacgaaacgccgtcttatgctgctggggctcctcgatcc
cgaggtaccggccaagttgtgatatttagcaagcggatcatcaaggactggagttcgtct
gacttctacatcctcaatttcacactcctactcaatggagaacagtttggatccagcttc
ggctatgaagttgcatcggcagatgtaaatggagatggattgccagacctacttattggt
gctcctttctatttctcaaaagaaaacggtggtgctgtttacttatatcttaacgacaag
cggcacttttctcaaaaatacaataagaggctaacgggaaaaccggaatctcaatttggc
atttcaatagctaatgctggagacttaaataaggacggttgcgaagatgtagccattggt
agtccatatgaagacaatggtgttgtttatattcacctggggaatagaaaaaatggtttg
cacacgaaagcagatcaagtgattagagcagagtctctaccaaatactatgaaaacattt
ggttattcactctcaggtggaactgatttagatgcgaacggatatcccgatttgctcgtg
ggagcttacgaaaatagtagtgtagctcttctgcggacaaggcctatcatagacattaaa
acttcaatacggccgtcgaaaacgattataaatatagacccttctgtgcaagggtgtgaa
aaggatcccaccgcaaacaacacttgcttccactttcaagcgtgctgcataatcaaatct
ctagtcaacactgcccaaaacataatacataacataaactatgtaattgaggctgaaacc
ttccctggcggaagaaaattttcacgagtattctttgattctgaaaaagttaatattgtc
aataagactatacaactaggcagaaattcggaagcctgtagggagcatattgtttatctt
aaaaataatacaagagacattaagacacctctcaaatttcaagtaacctacaaaatagta
cacgatgaacctaaatatattacgacgggtacattgcctaatattgacgactaccccgta
ctgaacgcaaccgcaacgaccaccttcactgccaacttcttgaatgattgtggagccgat
ggtgtttgtaccagcgatctagtcgtccagcctgttttgcaacttcctaaggctaaaaac
ggaaaatcttatacgttaacgttaggtcaagaagatgaaattaaacttgatataactgtt
gataactacggagagtcagcttacgaaagtcagttgtttgtgcaacataacgcaagcctg
cattacattgctgctaatattagcgataaacatgtgatttgtacaagtgtaaataagact
attgtatcgtgcatgttggaaaatccgtttaaaaatcagaatggagctgctactcctatt
actatgaggttcgacgcaagagctcttgaagacaatgaaccatctgtagttttctctgcg
tgggctaattcaacctccgtagaattgtatcctaacaaaacaccggccactgttgaggca
ttggtagtgaaaaacgctgaattattgataaaaggggctgcaagaccagaacaggtattt
tatggaggagaggtaaaaggagaatctgcgatggaatactttgatgacataggcacaaga
gttgtgcacacttatcaggtctacaacgagggtccatggcgcgtgtcatctctacaagta
gtaatctcatggccacatcaagtagcgtctgagaatgagcaaggcaagtggctgctgtac
ccagaggatgtcccaactgtggatggagaagctgatcaaagtaatggtgaatgttttatt
tccgaaactgaaatcaattcattgaagttgacaaagagacctggagttgccgaaccacat
ttagagaatttagaaatggacccattcctaacaactggcaaactgagcgtcagttcgatc
gaaaaacataatgagacaagctataaaaatgtcatccagtattcaagtgcttcagaaaat
aaagtcagacgaaaacgagaaaatgacattattaaagctgaagcttataccgataaagat
gggcaccggaaaaacgttgtgaatatgaactgtcataacaaaactgcaaagtgcatccag
ttccaatgcgtgatataccggttgggacgcatgcaagcgacaaccattacaattaaggcg
cggctgtggaacgcgactctggtggaggactacccgcgtgtcagtcatgtcaacattgcc
tcctccgcctacatcctcataccggagcattacaacatccaccagaacaaacaccacgat
gacatggcaacggtggagactgttgcctatccagacttgaacataagtgaaccgacagaa
gtgccattgtgggttataatagtgtcagtaattgtaggcttaatagtattaattctttta
ataatcgcgctatggaagctcgggttcttcaagagaagtaggccggatccgactctttcg
ggtaacttggagaagaataaccatgagtccagcccgttcattggacgggacaggaatagt
aagcgatag
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integrated database retrieval system
