Choristoneura fumiferana (eastern spruce budworm): 141437505
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Entry
141437505 CDS
T11020
Symbol
SerT
Name
(RefSeq) serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
141437505 (SerT)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfum02000
]
141437505 (SerT)
Transporters [BR:
cfum02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
141437505 (SerT)
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
141437505
NCBI-ProteinID:
XP_073957029
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Position
17:complement(2231913..2277772)
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AA seq
580 aa
AA seq
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MPPDPPPTTATTPQTAKARSVVVSLTPERVRETWAKKAEFLLAVVGFAVDLGNVWRFPYI
CYQNGGGAFLIPYCIMLLFGGLPLFFMELALGQYHRCGCLTLWKKICPALKGVGYAICMI
DIYMGMYYNTIIGWAVYYLVASLASINSVLPWTSCDNEWNTPLCSPVTSPQTNPNSSTPA
KEFFERNVLEQHRSNGLDYMGPIKPSLALCVFGVFVLVYFSLWKGVRSTGKVVWVTALAP
YVVLLILLARGVSLPGATEGIRYYLTPEWHKLKNSKVWIDAASQIFFSLGPGFGTLLALS
SYNKFNNNCYRDALITSSINCLTSFLAGFVIFSVLGYMAHVQHKSIEEVGLEGPGLVFIV
YPEAIATMTGSVFWAIIFFLMLITLGLDSTFGGLEAITTALCDEYPRALGRHREIFVAVL
LCLIYICALPTTTYGGVYLVDLLNVYGPGLAILFVVFAEAAGVCWVYGVDRFSEDVRSML
GHTPGWFWRACWSYISPVFLLVLFVFSLLAHEEMLGGEYSYPPWSITVGWAMTGTTVSCI
PLYMLYKFIITPGNFVHRIKTIMSPEETSIPPTDPALCSL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgccaccggatcccccgcccaccaccgccaccaccccgcaaacggcgaaagccagatcg
gtggtggtgtcgctgactccggagcgcgtgcgggagacctgggccaagaaggcggagttc
ctgctcgccgtagtgggattcgccgtcgacctgggcaacgtctggcggttcccctacatc
tgctaccagaatggaggaggtgccttcttaatcccgtactgcatcatgctgctcttcggt
ggtctgccgctcttcttcatggagctggcgctggggcagtaccaccgatgcggctgcctc
acgctgtggaaaaagatctgcccggcgttgaaaggagtaggctacgcgatatgcatgatc
gacatctacatgggcatgtactacaacaccatcatcggctgggcggtgtactacctggtg
gcttccctcgcctccatcaactcggtccttccctggaccagctgcgacaacgaatggaac
acgcccctgtgttcgcccgtcacttcacctcagaccaatcccaactcttctaccccggcc
aaggagttctttgagcggaacgttttggaacagcatcgatccaacgggctggactacatg
ggtcccatcaagccgtccctcgccctctgcgtcttcggagtgttcgtgctcgtctacttc
tcgctgtggaaaggggttcggagtactggcaaggtggtctgggtcactgccctggctccg
tacgtggtgctgctgatcctgctggcgcgaggagtcagcctgcccggcgccaccgagggc
atccggtactacctcactccagaatggcacaagttgaaaaactctaaggtatggatcgac
gcagcctcccagatcttcttctcgctcggcccaggcttcggcaccttgctagcgctcagc
agctacaacaagttcaacaacaactgttaccgcgacgccctcatcacctcctccattaac
tgcctcaccagcttcctcgctggatttgtcatcttttctgttttggggtatatggctcac
gtccagcacaagagcatcgaggaggtggggctggaaggcccagggttggtgttcatcgtg
tacccggaagccatcgccaccatgacgggctccgtcttctgggccatcattttcttcctc
atgctgatcacgctgggcttggacagcacatttggaggtctagaagcaatcacgacggct
ctctgcgacgagtacccgcgcgccctgggcaggcaccgcgagatcttcgtcgccgtccta
ctgtgcctcatctacatatgcgccctacccaccactacttacggtggtgtgtacctggta
gacctcctgaacgtgtacggccccgggctggccatcctgttcgtggtgttcgctgaggcc
gcgggcgtctgctgggtgtacggggtcgaccggttctctgaggacgtgaggagcatgctg
ggacacacgcccggatggttttggagagcttgctggtcttatatcagccctgtattcctg
ctggtgctcttcgtattctccctactggcccacgaggagatgctgggcggcgagtactcg
tacccgccctggtccatcacggtgggctgggccatgaccggcaccactgtctcctgcatc
ccactctacatgctgtacaagttcatcattaccccaggaaatttcgttcaccgcatcaag
accatcatgagcccagaggagacgtccataccaccgacagacccggcgctctgcagcctg
tga
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