Choristoneura fumiferana (eastern spruce budworm): 141437612
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Entry
141437612 CDS
T11020
Name
(RefSeq) semaphorin-1A-like
KO
K06842
semaphorin 6
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
141437612
NCBI-ProteinID:
XP_073957158
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Position
18:complement(13648606..13791761)
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AA seq
747 aa
AA seq
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MAVARAVLVLLASTAQAWMPDANARIHIKYGDETSEQFVGNATAPDYFRILDKDDFSIIV
GGRNTVYNLSLYDLSENLDQRLEWQSTDAHRELCQLKGKSADECQNYPRVAARSHGRLMV
CGTNAFKPLCRRYARHPPTHHLEEFDGSGRCPYDPQHNSTAIFADGQLYTATAADFSGTD
PLIYREPVRTERSDLRLLNDPSFVGAIASTSHVYFFYRETAVEYMNCGKSVYSRVARVCL
NDKGGPHTFSDRWTSFLKTRLNCSMPGEYPFYFDEIQATTELINGIYGSGSSRNDIIYAV
FTTPQNAIGGSAVCAFAMRDILDAFEGTFKGQESMNSNWLPLEKEKVPEPRPGSCVEDSR
TLSDSGVNFIKTHPLMDKAIPSFLSRPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVIYV
GTDDGRVIKSVNVASNEGVFDSSTEEDSRSPVRTAVISEVQVLPQGVPIKQMHVALTTEK
LIIASGDIIKAVSLSHCGNVQSCRECVALQDPHCAWDSKQQQCAWVGNRQFPNPERFLQN
VEHGKTEICNKLPALLPGDRHSNRNPGTKKPVLSEPDTRKTDDIQNEILIEVVETNVLSE
EKTNNNKHETDSLTVEAADGNIYSAQALMTAVVASCLVTLMVGFVIGYLFSRRFRHPFFT
DTSPFNEQHNHLNRLSPLETPLNANSAYMPPRSKNVNMVANVCPLAKQDNLHLELGKERT
LDLRNSTESLDKDLKCGTLQKVKKTYI
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgcccgagctgtgctggtgttgctagcgtctacggcacaagcgtggatgccc
gacgccaacgcacgtatacatatcaaatatggcgatgaaacttcagaacaattcgtcggc
aacgcgacagcgccagactacttccgtattttagataaagatgacttctcgattattgta
ggtggcagaaacactgtctacaacctcagcctctacgacttgtcggagaatttagatcag
cgtctagaatggcaatcaacggatgcacatagggagctatgccaattgaagggcaaatca
gcagacgaatgtcaaaactacccgcgcgtggcggcacgttctcacggccgcctgatggtc
tgcggcaccaacgcgttcaagccgctgtgccggcggtacgcccgacacccgccgacacac
cacctcgaagaattcgatggctccgggcgctgcccctacgatccccaacacaattcgacc
gccatttttgctgacggtcaattatatactgcgacagcggccgacttctccgggacggat
ccgctaatctaccgcgagccggtgcggacggagcgctccgacctgcgcctactgaacgac
ccctcatttgttggtgccatcgcatcaacaagccacgtctactttttttatcgcgaaacc
gcggtcgaatacatgaactgcggcaagtcggtgtattcgcgagtggccagagtgtgtctt
aacgataaaggtggtccacacacgttcagcgaccggtggacttctttcctcaaaacccgc
ctcaactgttcgatgcccggagaatatccattctattttgacgaaattcaggcgacgacg
gagttaattaacgggatttatggaagtggcagtagcagaaatgatatcatatatgcagta
tttactacaccgcaaaatgctataggaggctcagcagtgtgtgcatttgcgatgagagat
attttagatgcttttgagggaacgttcaaaggccaagagagtatgaactctaattggttg
ccattagagaaagaaaaggttcctgagcctagaccaggctcatgtgtggaagacagccga
actctatctgactcgggcgttaactttataaaaacacatccactaatggacaaagcaatt
ccctctttcttatcgagaccaatattaattagagttagtttacaatatagattttcagct
atcgctgtacatcctcaagtgcaagccatgaatggcaataaatatgatgttatatacgtt
ggcactgatgatggtagagtcataaaatctgtcaacgtagcatcaaatgagggtgttttc
gattcgagcactgaagaggacagtagaagtcctgtaagaactgcagtgatatcagaggtt
caagttctccctcaaggagtgcccataaagcagatgcacgtcgcactcactacagagaaa
ttaattatagcatccggtgacatcattaaagctgtgtcattgtcacattgtggcaacgtg
cagtcgtgcagagaatgtgtagcacttcaagatccgcattgcgcatgggactccaagcaa
caacaatgcgcttgggtcggaaaccgacaatttccgaacccagaaagatttctacaaaat
gtagagcacggaaagactgaaatatgtaataaactacccgcccttctgccgggtgaccga
catagtaatagaaacccgggcacaaagaagcccgtgctatctgaacccgacacacgaaag
actgatgacattcaaaatgaaatattaatagaagttgtcgaaacgaacgttctctccgaa
gaaaaaactaataataacaaacacgaaacagactcgctgacggttgaagccgcagatggc
aacatatacagcgcgcaggcgctgatgacagctgtggtggcgtcctgcttggtcacgctg
atggttggctttgttatcggatatctgttctcgcgaagatttcgacacccattttttacc
gatacctcaccctttaatgaacaacacaatcatttaaacagattaagtccattagagacg
cctctgaatgctaactccgcgtacatgccaccgcgttcaaagaacgttaacatggtggcc
aacgtctgtccactcgccaagcaggacaacctacatctcgagctcggcaaggagcgcacg
ctagacctccgcaactctacagaatcactcgacaaggatctcaaatgcggcaccctacag
aaagtgaaaaagacttacatttga
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