Choristoneura fumiferana (eastern spruce budworm): 141437736
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Entry
141437736 CDS
T11020
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141437736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfum03019
]
141437736
03016 Transfer RNA biogenesis [BR:
cfum03016
]
141437736
03012 Translation factors [BR:
cfum03012
]
141437736
04131 Membrane trafficking [BR:
cfum04131
]
141437736
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfum04147
]
141437736
Messenger RNA biogenesis [BR:
cfum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
141437736
Transfer RNA biogenesis [BR:
cfum03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
141437736
Translation factors [BR:
cfum03012
]
Eukaryotic type
Elongation factors
141437736
Membrane trafficking [BR:
cfum04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
141437736
Exosome [BR:
cfum04147
]
Exosomal proteins
Proteins found in most exosomes
141437736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
141437736
NCBI-ProteinID:
XP_073957326
LinkDB
All DBs
Position
18:complement(19212258..19214724)
Genome browser
AA seq
463 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYNEGRFEEIKKEVSSYIKK
IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWNVERKEGKAEGKCLIEALDAILPPAR
PTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTIVVFAPANITTEVKSVEMHHEALQ
EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPV
LDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPP
LGRFAVRDMRQTVAVGVIKAVNFKEAGGGKVTKAAEKATKGKK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggaaaagattcacattaacattgtcgtgatcggacacgtcgactccggcaag
tccaccaccaccggccacttgatctacaaatgcggtggtatcgacaaacgtaccatcgag
aagttcgagaaggaggcccaggaaatgggtaagggctccttcaagtacgcctgggtgttg
gacaaactgaaggctgagcgcgagcgtggtatcaccatcgatatcgcgctgtggaagttc
gagactgccaagtactacgtgaccatcatcgatgctcccggacacagggatttcattaaa
aacatgatcactggtacgtcgcaggccgactgcgccgtgctgatcgtcgccgccggtact
ggtgagttcgaggctggtatctcgaagaacggccagacccgcgagcacgcgctgctcgcc
ttcacgctcggagtcaagcagctcatcgtgggcgtcaacaagatggactccaccgagccc
ccctacaatgagggccgtttcgaggaaatcaagaaggaagtttcctcttacatcaagaag
atcggttacaacccagctgccgtcgctttcgttcccatttctggctggcacggagacaac
atgctggagccttccaccaaaatgccttggttcaagggatggaacgttgagcgcaaagag
ggcaaggctgaaggcaagtgcctcatcgaggctcttgatgccatccttccccctgcccgc
cccacagacaaggccctgcgtcttcccctgcaagacgtctacaaaatcggcggtattggt
acggtgcccgtaggccgtgtcgaaactggtattctcaagcctggtactattgttgtattc
gcacccgctaacatcactactgaagtcaagtccgtggagatgcatcacgaagccctgcag
gaggccgtacccggcgacaacgtcggtttcaacgtcaagaacgtgtccgttaaggagctg
cgtcgtggctacgtggctggcgactccaagaacaacccgcccaagggtgccgccgacttc
accgcacaagtcatcgtgctcaaccaccctggacagatttcaaacggttacacgcctgta
ctcgattgccacacagctcacattgcctgcaagttcgcagaaatcaaagagaaggttgac
cgtcgtactggcaaatccactgaagataaccccaaatccatcaagtccggagacgccgcc
atcgtcaacctggtcccctccaagcctctgtgcgtggagtccttccaggagttcccccct
ctcggtcgtttcgccgtgcgtgacatgaggcagacggtcgccgtgggcgtcattaaggct
gtcaacttcaaggaagccggcggcggcaaggtcaccaaagctgccgagaaggccaccaag
ggcaagaagtag
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