Choristoneura fumiferana (eastern spruce budworm): 141437998
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Entry
141437998 CDS
T11020
Symbol
Cul4
Name
(RefSeq) cullin 4
KO
K10609
cullin 4
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03420
Nucleotide excision repair
cfum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
141437998 (Cul4)
09124 Replication and repair
03420 Nucleotide excision repair
141437998 (Cul4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cfum04121
]
141437998 (Cul4)
03400 DNA repair and recombination proteins [BR:
cfum03400
]
141437998 (Cul4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfum04147
]
141437998 (Cul4)
Ubiquitin system [BR:
cfum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
141437998 (Cul4)
DNA repair and recombination proteins [BR:
cfum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
141437998 (Cul4)
TCR (transcription coupled repair) factors
Cul4-CSA complex
141437998 (Cul4)
Exosome [BR:
cfum04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
141437998 (Cul4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
DUF2018
Motif
Other DBs
NCBI-GeneID:
141437998
NCBI-ProteinID:
XP_073957718
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All DBs
Position
18:19878623..19896064
Genome browser
AA seq
792 aa
AA seq
DB search
MSGSAKTTVLAEEGGNQGRKRTLHNNEQCGKRAKTDEMSASEKKSNFSLLTPNSNGAAKS
SLTSLSSKHGATAKKLVIKNFKSKPKLPDNYQETTWSKLREAVVAIQTSTAIAYSLEELY
QAVENMCSHKMASQLYVNLTNLVEAHVKANIEQFLSESMDRQVFLKRMDDCWRAHCRQMI
MIRSIFLYLDRTYVLQNPSIHSIWDMGLDLFRHHIAMNTLVQTRAVDGLLLLIERERGGD
AVDISLLKSLLRMLSDLQIYQDAFEHKFLQATERLYAAEGQRLMRELAVPAYLAHVEKRL
REENERLLHYLDPSTKWQLIHTIERMLLSEHLTGILSKGLEALMDGPRLADLTTLYSLFS
RVKDGLTELCSHFNAYIKKKGRTIVIEPERDKTMVAELLEFKEQLDHIVAVCFMRNDRFL
YSMREAFEHFINQRQNKPAELIAKFVDVKLRAGNKEATEEELERLLDKIMVLFRFIHGKD
VFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEGMFKDMELSKDINIT
YKQHLAGTQDNSGIELSVYILTMGFWPTYGAAEARLPAALTRQQDHFTKFYLGKHSGRKL
TWQPTLGHCVLRAHFAQGNKELQVSLFQALVLLLFNDGDNLSFEEIKVASNIEEGELRRT
LQSLACGKARVLTKAPRGREVANTDHFCFNADFTNKLFRIKINQIQMKETSEEQKATEER
VFQDRQYQIDAAIVRVMKMRKALSHNLLISELYNQLKFPVKPADLKKRIESLIDRDYMER
DKDNPNQYNYVA
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggatcagctaaaactacagttttagcggaagaaggtggtaatcagggtagaaaa
cgtacgctacacaacaacgagcagtgcggtaaaagagctaaaacggacgaaatgagtgcc
agtgaaaagaaatctaacttttctttgttaacccctaactccaatggagctgcgaagagc
tccttgacgtcgttatcatcgaagcacggtgcgacagcgaagaaacttgttatcaagaat
ttcaaaagtaagccaaagctcccagacaactatcaggagacaacatggagcaaactgcgg
gaggctgtggtggccatccagacctccacggccatcgcctactcacttgaggagctgtac
caggctgtcgagaacatgtgcagtcacaagatggcatctcagctgtacgtgaacctgaca
aacctggtggaggctcatgtgaaagccaacattgaacagttcctctcggagagcatggac
cgccaggtcttcctcaaacgcatggacgactgctggcgagcccactgccgccagatgatc
atgatacggagtatcttcctttatctggaccgtacttatgtactgcagaatcctagtata
cattcaatttgggacatgggtctggacctgtttcggcaccatatcgcgatgaacacgctg
gtgcagacgcgcgccgtggacgggctgctgctgctgatcgagcgcgagcgcggcggcgac
gccgtcgacatctcgctgctcaagagtctgctgcggatgctgtccgatctgcagatctac
caggacgccttcgaacacaagttcctccaagcaacggagcgtctgtatgcggcggaaggc
caaagactgatgcgcgagctcgccgtaccggcctatttggcccacgtggagaaacggcta
agggaggaaaatgaacggctgctgcactacctagacccctccaccaaatggcagttaatc
cacacgatagagcgcatgttgctcagcgaacacctaacggggatccttagcaaagggcta
gaagcgttgatggacggcccgcggctcgcagacctgaccaccctgtatagtctgttcagc
cgcgtcaaagacggcctcacagagctgtgtagtcacttcaatgcttatatcaagaaaaaa
ggtcggacgatagtgatcgagccggagcgcgacaagacgatggtggcggagctcctagaa
ttcaaggaacaattggaccatattgtggctgtgtgcttcatgcgcaacgaccgcttcctt
tactccatgagagaggccttcgaacacttcatcaaccagcggcagaataaacctgcggaa
ctcattgctaaatttgtagacgtaaaactccgagcgggcaacaaagaagcgacggaagaa
gaattggagcggttgctcgacaaaataatggtgttgttcagatttatacacggcaaggat
gttttcgaggcgttctacaagaaagacttggcgaaacggctgctggttggcaagtcggcg
tccgtggacgctgagaagtctatgcttagtaagctgaagcaggagtgtgggggcggcttt
acttgtaaattagagggcatgttcaaggatatggagctgtccaaggatattaatattact
tataaacagcacctagcgggcacgcaagacaactccggcatagagctgtccgtgtacatc
ctgacgatgggcttctggccgacgtacggcgcggcggaggcgcggctgccggcggcgctg
acgcggcaacaggaccacttcaccaagttctacctgggcaagcactccggacggaagctc
acgtggcagcctacgctggggcactgtgtgctccgggcgcactttgcacagggtaacaaa
gagctgcaagtatcgctgttccaagcgctggtgcttctgttgttcaacgacggagacaac
ttgtccttcgaggagatcaaagtagcttctaatattgaggagggcgagctgcggcgcact
ctgcagtcgctcgcgtgcggcaaagcgcgcgtgctgacgaaggcgccgcgcggccgcgag
gtcgccaacacggaccacttctgtttcaacgctgacttcactaacaagctgttccgcatc
aagatcaaccagatacagatgaaggagactagcgaagagcaaaaggcgacggaagagcgc
gtgttccaagaccggcagtaccagatcgacgcggcgatcgtgcgcgtcatgaaaatgcgc
aaagcgctctcgcacaacctgctcatctcagaactgtacaaccagctcaagttccccgtc
aagcccgctgacctcaagaaacgcattgaatccctcatcgaccgcgactacatggagcga
gataaagacaaccccaaccagtacaactacgtggcgtaa
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integrated database retrieval system
