Choristoneura fumiferana (eastern spruce budworm): 141438184
Help
Entry
141438184 CDS
T11020
Symbol
Ca-Ma2d
Name
(RefSeq) ca[2+] channel Muscle-specific alpha2/delta subunit
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cfum04040
]
141438184 (Ca-Ma2d)
Ion channels [BR:
cfum04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
141438184 (Ca-Ma2d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_3
VWA_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
141438184
NCBI-ProteinID:
XP_073958032
LinkDB
All DBs
Position
18:complement(17326194..17351645)
Genome browser
AA seq
1215 aa
AA seq
DB search
MRLALCALLLLLPAPAPAWRSDTVKAWSRALGEELWGLKVALTKSDQIKAKYKEMNASVK
RKNGRQILDSSLESVATMLTKKINAVKCIHATAKQLVREFQLNNETVDANFTYCSAKYSN
FTYEDGSDLKRDSDKLPNFVKKEQLHYLPSNLERDSHFYNISVNTNISCVHVPTNIYFLE
TEAQNAIVWSKGLNDIFTRNYQADPSLAWQYFGTANGILRFYPGMPWNMKETDIYDCRVQ
SWYIEAATCSKDIIVLFDVSGSMTGFKNYVARTTLKSLLDTLSNNDYVNVYAFKNDTHLV
MNCSEGLVQATKENIGTILHTLTPTDGGKKHKILLEGNANLTKAYIKAFEMLKVKRVESK
CNVSSPLGCNQLVMLITDYVPGNLSEVFDEYNREVVDGKTYIPVRVFTYLIGKEVTNVAE
ITSMACNNRGYHVHIHSVEEVQQQVLKYINVIARPMILDGSPPPPTWTHASIDATRTKTW
GVISDISKHDEDKLVTSVAIPAFDSESNQDAILIGVAGTDVPIDSIAKLGQPHQLGVNGY
SFIVSNNGYLLLHPLLKTSINEELQVNYNSVDFVEVEQVDDGKGARELGDKILGLRQNLT
DGDDGNMTDVEVLFHYDDMRRISRVKHDYYFRGLNETPFSMGISLPKGYGDTELMLKDNP
LEATQGQSLTGINVTDYFKYSYRVHPDWVYCKYHYLEGHESDNPEIEIWKFLVNISKNLT
DISKKQYTKEASETFSVETHCGDAKTKLGKDDYYCNEDLVKQLVFDAKLSAPYFQEWTDH
TAYEEELAKKYNVSVRFIMTSSGLTRWHYLYDDDKNEQVNETGSRLKNFGGKVLGDHYST
TIEVTPYKAAVLQSTINRESLVVATPLPVLDTTIVNPTPVIQDGDITITASYAIFYKDSN
IETPASVVGFQFSYLHFRDRFMKIIESVDDKSLSCNNKDYECYVIDSSGYIVLSMAMEEV
GQFFGMVQPYVLKSFIEKKIFEHVEVFNYQALCPLSILKQSANDSWLLDTPWSLIKWFLT
ELLLIVSDIYSWNTYTHANSIVEDAEQGTTNAPPKNEKAPPGEKTFSCDHSITLYILNQT
HFLKTVEASPIVYEEKFGKCHPPYWASYVKNTNLLLVVVEKNDNAMFDDDQKCLPPPMTN
PVPTNDSIQSSEPCHKLNLAKLPRRRLEGCFTYHEGEANLPRSACGRGTTAVAEPRAVAL
TTLLVAVAYRLLLHG
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcgcgctttgcgcgctgctgctgctgctgccggcgccggcgccggcctggcgg
tccgatacagtgaaagcctggagccgtgctcttggcgaggagctgtggggactcaaggta
gccctcaccaaatctgatcagataaaagccaaatacaaagaaatgaacgcaagtgtaaaa
agaaaaaacggaagacaaatattagattcttcattagaatctgttgcgacaatgcttaca
aaaaaaatcaacgccgttaagtgtatccacgcaacggctaagcagttagtacgtgagttc
caactgaacaatgagacagtggatgcgaactttacgtattgctccgcaaagtattccaac
ttcacatacgaagacggctctgatctaaagagagatagcgacaaactcccaaattttgta
aaaaaggaacaattgcactacctgccgagcaatctcgaaagggactctcacttctacaac
ataagcgttaatacgaacattagctgtgtgcatgtccccaccaatatttacttcttagaa
acagaggcacaaaacgctattgtgtggtcaaaaggccttaacgacatcttcacaaggaat
tatcaagccgacccatctctagcgtggcaatacttcggaaccgcgaacggcatccttcgc
ttctaccccgggatgccgtggaacatgaaggagaccgacatttatgattgccgcgtacag
tcctggtacatcgaggccgctacttgctccaaagacatcattgtactcttcgatgtatcc
ggttcaatgaccggtttcaagaactacgttgctagaaccaccctaaagtcgctattggac
accttatcaaacaatgattacgtaaatgtgtatgccttcaaaaatgacactcacctagtg
atgaactgttccgaaggactagtgcaagcgacaaaagaaaatattggaactatattacat
actcttactccaacggatggtgggaaaaagcacaagattctgttagaaggcaacgccaac
cttactaaggcttatataaaagcgtttgaaatgttaaaagtgaaaagagttgaatccaaa
tgcaacgtctccagccccctgggctgtaaccagttggtgatgctgatcaccgactatgtg
cctggaaacctttcggaagtcttcgacgagtacaatcgagaagtggtcgatggcaagacc
tacatacccgtcagagtgtttacttatcttataggaaaggaggttaccaatgtcgcagaa
ataacatcaatggcttgtaacaatagaggttaccacgtgcacattcactcggtggaggag
gtgcagcagcaggtgctgaagtatatcaacgtgatcgcgcgccccatgatcctggacggc
agccccccgccccccacatggactcacgccagtatcgacgccacgagaactaaaacatgg
ggtgtcatctcggacatctctaagcacgatgaggacaagttggtgacgtcggtggcgatt
cccgcgttcgactccgagtccaaccaggacgccatcttgatcggcgtagcgggcaccgat
gtacccatcgacagcatagcgaagcttggccagccgcaccagctcggcgtcaatggatat
tcatttatcgtcagtaacaacgggtacttgctacttcatccactgcttaaaacctctata
aacgaagagctacaagtaaactacaacagcgtggatttcgtggaggtggaacaggtggat
gatggaaagggtgcgcgtgagctcggagacaagatcctgggtctgcggcagaatctcacc
gacggagatgacgggaatatgacagacgttgaagtgctatttcactacgacgatatgaga
aggatatcccgcgtcaagcacgactattattttcgtgggttgaacgagacaccgttctcg
atgggaatctctttgcccaaaggctacggagacactgaactgatgctcaaagacaacccc
ctcgaagcaacgcaaggacaatctctcacaggcataaacgtgacagactatttcaaatat
agctacagggtgcatcccgattgggtgtattgcaagtaccattacctggagggacacgag
tcagacaatcctgaaatcgaaatttggaaatttttagtcaacatatcgaaaaatctgacc
gatatttcgaagaagcagtatacgaaggaagcttcagaaacattttccgtagaaactcac
tgcggagacgctaaaacgaaacttggcaaagacgattactactgcaacgaggatcttgta
aagcagctagtgtttgatgccaagctctcggcgccttacttccaagagtggacagaccac
accgcgtacgaagaagaactggctaaaaaatacaacgtcagcgtgcgatttattatgacc
tccagtggactcacgaggtggcattacctgtatgatgatgacaagaatgagcaagtcaac
gagactggctcacggctgaagaattttggtggcaaagtattgggagaccattattcaact
acaatagaggtaactccatataaagcagcagtcctgcaaagtacgatcaaccgcgagtct
cttgtggttgccactccgctccccgtcttggatacgaccattgtcaacccaacgcccgtc
atccaggacggtgacatcaccatcaccgctagttacgccattttctataaagacagtaac
attgagactccagcgtccgtcgtgggatttcaattttcatatttacacttccgagataga
tttatgaagattattgagtctgtggatgataagtctctgtcatgcaacaacaaggactat
gaatgttatgtaatagacagttctggctacatagttctgtcaatggcaatggaggaagtg
ggccaattcttcggcatggtccagccttatgtcttaaagtcctttatagaaaagaagata
ttcgaacatgtagaggttttcaattatcaagccttgtgcccgttatcaatacttaaacaa
tcagctaacgactcgtggctgctagatacgccctggagtttaataaagtggtttctaact
gaactgttattaatagtatcagatatctacagctggaatacatatacgcatgcaaatagc
atagtcgaagatgcagaacaaggaacaacaaatgcgccaccaaagaacgaaaaggctcca
cctggagaaaaaacgttttcatgcgatcactcgattacattgtacatattgaaccagacg
cactttttgaagactgttgaggcttcaccaatcgtgtacgaagagaaattcggcaagtgt
caccctccgtactgggcttcctatgtgaagaacacaaatttgctgttggtggtggtggag
aagaacgacaatgcaatgtttgatgatgatcagaagtgcctgccaccgccgatgacgaat
ccggtgccgactaacgactcgattcaaagctcggaaccttgccacaaattgaatttggcg
aagctgccacgacggaggctcgaaggctgttttacttaccatgaaggcgaggcgaatctt
ccaaggtcagcttgtgggcggggcaccacggcggtggccgagccgcgtgctgtggcactc
acgaccctgctggttgctgtggcttacagattattactgcacggctag
DBGET
integrated database retrieval system
