KEGG   Choristoneura fumiferana (eastern spruce budworm): 141438186
Entry
141438186         CDS       T11020                                 
Name
(RefSeq) LOW QUALITY PROTEIN: U2 snRNP-associated SURP motif-containing protein
  KO
K12842  U2-associated protein SR140
Organism
cfum  Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cfum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    141438186
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cfum03041]
    141438186
Spliceosome [BR:cfum03041]
 Complex A
  U2 snRNP components
   U2 related factors
    141438186
 Complex B
    141438186
SSDB
Motif
Pfam: Surp RRM_1 CID cwf21 RRM_7 CTK3
Other DBs
NCBI-GeneID: 141438186
NCBI-ProteinID: XP_073958038
LinkDB
Position
18:complement(19595954..19612527)
AA seq 879 aa
MKKIPEQKLQAFSVGSMGARNLSKKELEELRKKEEEEAAAHVFKEFVETFQEAPSTTSKV
WVKAGTYDAGARKEDTSERGKLYKPVSRFDDKRGASAEEVVRSLAQRNDQSARLRAKQNK
DKKKSNLELFKEELRQIQEERSERHKYKNVLRERGTAVGAEPVIDMLPDVGSYDTGDPNT
TNLYLGNLNPKITEQQLMEIFGRYGPLASIKIMWPRSDEEKARGRNCGFVAFMSRRDGER
ALRCINGKEIMSYEMKLGWGKAVVIPPVPIYIPPALQTPSQPPPPSGLPFNAQPPRHRAN
KIPRVRPAEYYPSDPEDREAYDEILSQSIVKVVVPTERNILMLIHRMVEFVIREGPMFEA
IIMNKEMNNPFFRFLFENQSPAHVYYRWKLYSMLQGDSPKQWALNDFRMFKGGSVWRPPV
MNLYTAGMPDELVDEDETKDNIRGTLSINQRDRLEELIRGLTPSRTAIGEAMAWCLEHAE
AAGEVTQCLAESLAGEHTAPHKRVARLYLLSDILHNAGAKLTNASAFRSAIQSRLLEIMR
DCHTAWTAMPSRLQQEGFRARVTRILQAWADWAVYPTDLLRAASDALCGRAPRDKEEEED
IDGVSEAEAGSGASSPASTGSWGGGGAGPLDGAALRRLAATRHPPPPPPPDIDGVPVDED
IDGVPLEAPRPAGGFVPSRWERVEPAAEAWQPEPPAPPDPSRRRRPPAAPASAXSLPEEL
SLKRETLREIEVRVLKYADELEAGLRARRAALTTHQQLQHYRRKLIKKASREAKVAVEVA
LESPSPRRRPSPEDDTYSTTSKKSKKSREPSLSPPLKRSRHSDRKSRSRSRERERDSERS
RDRDRERERERERDRRRRSPATPPGHHHRKHSKHSKYKY
NT seq 2640 nt   +upstreamnt  +downstreamnt
atgaagaaaatacctgagcaaaagctacaagctttctccgttggttccatgggggccaga
aacctatcaaagaaggaactagaagaattgagaaagaaggaagaagaagaagctgctgcc
catgtgttcaaagagtttgtggagacattccaagaggcacccagtaccacttcaaaggtt
tgggtaaaagcaggaacttatgatgctggtgccagaaaggaagatacctcggagagaggc
aagctctacaagccggtgtcccgcttcgacgacaaacgtggcgccagcgccgaggaagtg
gtgcgcagccttgcgcaacgcaacgaccaatcggcgcggctgcgcgccaaacagaataag
gataagaagaaaagcaacttggaactgttcaaagaggaactgagacagattcaagaggag
cgttccgagcggcacaaatacaagaatgtactgcgcgagcgcggcacggcggtcggcgcc
gagccggtcatcgatatgctgcccgacgtcggctcatacgacaccggggaccctaacacg
actaatctgtaccttggcaacctaaaccctaagataacagagcagcagttaatggagata
ttcggtcgctacggtccgcttgctagcatcaagataatgtggccgcgatcggatgaggag
aaagcgcgcggccgcaactgcggcttcgttgcgtttatgtcgcgtcgcgacggcgagcgc
gcgctgcgatgtatcaacggcaaagagataatgagttacgagatgaagctgggctggggc
aaggcggtggtgatcccgccggtgccgatctacatcccgcccgccctgcagacgcccagc
cagccgccgccgccctccggcctgcccttcaacgcgcagccgcccaggcatagagccaat
aagatcccgcgcgtgcggccggccgaatactatccgagtgatcccgaagatcgcgaagct
tatgacgagatattatctcaatccatcgtcaaagttgtagtaccaacggagagaaacatt
ttaatgctaatccaccgcatggtcgagttcgtgatccgagaagggccaatgtttgaagcg
atcataatgaacaaggagatgaacaatccgttcttccggttcctgttcgagaaccagtcg
ccggcgcacgtttactaccggtggaagctgtattcgatgctgcagggcgactcgcccaag
cagtgggctttgaacgactttaggatgttcaaaggtggttcggtgtggcggccgccggtc
atgaatctttacacagcgggcatgcccgatgaattagtcgacgaggacgaaaccaaagac
aacattcgaggcacgctctctatcaatcagcgcgaccgcttagaggagctgatccgcgga
ctgacgccgtcgcggaccgccatcggcgaggccatggcttggtgcctcgaacatgccgaa
gctgcaggagaggtgacgcagtgcttggcagaatctctagcaggagaacacacggcgccg
cataagcgcgtagcccggctatacctactgtcggatatactgcacaatgctggagccaag
ctcactaacgccagtgctttcaggagcgccatccaatcccggttgctggaaataatgcgc
gactgccacacggcgtggacggcgatgccgtcgcgtctgcagcaggagggcttccgcgcg
cgcgtcacgcgcatactgcaggcctgggccgactgggccgtctaccccacggacttgcta
cgggccgccagcgacgcgctatgtggccgcgcgccccgcgacaaggaggaggaggaggac
atcgacggcgtgtcggaggcggaggcggggtcgggcgcgtcgtcgcccgcgtccacgggc
tcgtggggcggcggcggcgcgggcccgctggacggcgccgcgctgcgccgcctcgccgcc
acgagacacccgccgccgccgccgccgcccgacatcgacggcgtgccagtggacgaggac
atcgacggcgtcccgctggaggcgccgcggccggcgggcggcttcgtgccgtcccgctgg
gagcgcgtggagcccgcggcggaagcctggcaacccgagccgcccgcgccgcccgacccg
agccgccggcgccgcccgccagcagcgccagcgtcagcgntgtcgctgccggaggagctg
tcgctgaagcgagagacgctgcgcgagatagaggtgcgcgtgctgaagtacgccgacgag
ctggaggccggcctgcgcgcgagacgcgccgccctcaccacgcaccagcagctacagcac
tacaggcggaagctcatcaagaaggcgtcccgtgaagcgaaggtggcggtcgaggtggcg
ttggagtcaccatcgccgaggcggcgaccttcgccagaagacgacacctactcaactacg
tcgaaaaaatcaaaaaaatctcgcgagccgtctttgtcgccgcccttgaaaaggtcacga
catagtgaccgcaaatcccgatccagatcgcgcgaaagagaacgagacagcgagcgttca
cgcgacagggaccgcgaacgggagcgcgagcgcgaaagggacagacgccgccgctcgccg
gccacgccccccggtcaccatcatcgcaaacacagcaagcactccaagtataagtactag

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