Choristoneura fumiferana (eastern spruce budworm): 141438568
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Entry
141438568 CDS
T11020
Name
(RefSeq) lumican-like
KO
K06248
chondroadherin
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141438568
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cfum00535
]
141438568
Proteoglycans [BR:
cfum00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
141438568
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
Motif
Other DBs
NCBI-GeneID:
141438568
NCBI-ProteinID:
XP_073958543
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All DBs
Position
Z:10704719..10710747
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AA seq
344 aa
AA seq
DB search
MASRVWWLATALIASACHTALGKCDIWSVCPPCDEFIEAGKINNNVTDLYLGDCNITTTN
LDNLKYYPKLKSLHLYGNKISQIKAGTFDSLTNLYYLFLKQNAIVGRDLPAHLFRNWHSS
KQLYINFDDNNMIDTPDDLFQGLDLFGLALNNCSLREFPSFVKRQVFQDMQYLQLEHNLI
SKLDDPDTFASNINLETLFISNNIIDFLHADLLKPLAKIEDIYMKNNRIRIIPDGFFHDK
ASLSTVTLANNLIEHLPANTFLGTRLGYLSVTGNRLRHLPANFLSELQTNGVSLKVFYFD
QNPWQFSCVNKLLSEVKNQNIIYNTGVDHEYRHHLFEYDLFKCE
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacgcgtgtggtggctggcgacagcgctgatcgcttcagcgtgtcatactgcg
cttggcaaatgtgacatatggtctgtctgccctccttgtgacgaattcatagaagcaggc
aaaataaataacaacgttaccgatttatatttaggtgattgtaatataacaacaactaat
ctggataatttaaagtattatccgaaattgaaatccctacatctttatggaaataaaatt
agccaaatcaaagctggcacgtttgactccttaacaaatttatattatttgtttttgaaa
caaaatgctattgtaggaagggacttaccagctcatttattcagaaactggcactcatca
aaacaattatacatcaactttgatgataacaacatgatagacacgccagatgatctgttc
caagggttggacctgttcgggttggccttaaacaattgctcactacgggaattcccatca
ttcgtcaagcgacaggtattccaagacatgcaataccttcagttagagcataatttgatt
tccaaattagatgatccagatacatttgctagcaatataaatctggaaacgttgtttatc
tcaaataacatcatagattttttacatgcagacctattaaaacctcttgctaagatagaa
gatatttatatgaaaaataacagaataagaataatcccagacggtttttttcatgataaa
gcttctttatcaactgttactttggcgaacaaccttattgaacatttgcctgcgaatact
ttcctcggcactaggctgggttatctgtcagtaactggaaacagattaagacatttgcct
gctaacttcctttctgaacttcaaacaaacggcgtgagtttaaaagtgttttattttgat
caaaacccatggcagttctcctgtgtcaataaattattaagtgaagtgaaaaaccagaat
ataatatataatacaggagttgatcatgaatacaggcatcatctgttcgagtacgattta
tttaagtgtgaatga
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