Choristoneura fumiferana (eastern spruce budworm): 141438677
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Entry
141438677 CDS
T11020
Symbol
sv
Name
(RefSeq) paired box protein shaven isoform X1
KO
K15608
paired box protein 2
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfum03000
]
141438677 (sv)
04131 Membrane trafficking [BR:
cfum04131
]
141438677 (sv)
03036 Chromosome and associated proteins [BR:
cfum03036
]
141438677 (sv)
Transcription factors [BR:
cfum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
141438677 (sv)
Membrane trafficking [BR:
cfum04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
141438677 (sv)
Chromosome and associated proteins [BR:
cfum03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
141438677 (sv)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
DUF6115
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
141438677
NCBI-ProteinID:
XP_073958666
LinkDB
All DBs
Position
19:complement(10806893..10992018)
Genome browser
AA seq
461 aa
AA seq
DB search
MDLHAPPLIVHGYEPHAPLLEVEGLDPHSPQQKVLIHAPTLQGQELMGDHRNGEYDFTDE
QYHAHSSNQSGDGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHSGVRPCDISRQLRVSHG
CVSKILSRTPVGRPGACALPTQSVARYYETGSFKAGVIGGSKPKVATPPVVDAIAAYKRE
NPTMFAWEIRDRLLSEGICSQDNVPSVSSINRIVRNKAAEKAKHAHNQQQQQEQEISSAQ
GSVVSVITHSGNAGTTAVLSPTTEQHVPNTGSYSINGILGIEQVELHNGNGLKRKRHEDQ
DENRDFNSHSEDDVKRQRSHYNGDQIYSNLWSSSKWSLKDEYKLLSELGGAAGGATGYYG
ELFDAPYEHAAHPHYTPHSGKATNDSTGSNGGAGGEPPSAAASPDAAALVVLQPPAPPYP
PYAHYDGATTLASEYAYPAPYSQYSPYGAPYSHTTGLLTKW
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggatttacacgcgccgccgttgattgtacatgggtatgagccccatgccccactcttg
gaggtggaaggcttggatcctcatagtcctcagcagaaagtcctgattcatgcgcctacc
ctgcagggtcaggagttgatgggagatcatcggaatggagagtatgacttcacagatgag
cagtaccacgcacacagcagcaaccagagcggcgatggccacggaggggtaaatcaactc
ggtggcgtattcgtcaacggtcggccactacccgatgtcgtccgacagaggatagtcgag
ctcgcgcacagcggcgtgcgaccctgcgacatcagccggcagctgcgggtgtcccatgga
tgcgtgtcgaagatactgtctagaactcctgtgggccggccgggcgcctgcgctctaccc
acccaatccgtagctaggtactacgaaaccggcagcttcaaggccggcgtgatcggcggc
tcgaagcccaaagttgccacccccccagtcgtggacgccatcgcggcctacaagcgggag
aaccccaccatgttcgcgtgggagatccgcgaccggctcctcagcgagggcatctgtagt
caagataacgtgccttccgtctccagtattaacaggattgttcggaacaaagcggcggag
aaagcgaagcacgcgcacaatcagcagcagcagcaagaacaggagatctcctcggcgcag
ggcagcgtcgtgtctgtgataacccactccggcaatgctggcacaacggccgtgctgtct
cccaccacggaacagcatgtaccaaacactggcagctacagcatcaacggcatcctcggc
atcgagcaagttgagctgcacaacggcaacggactgaagaggaaacggcatgaagaccag
gatgaaaaccgggacttcaatagccattcggaagacgacgtcaagcgacaaagaagtcac
tataacggcgatcaaatatattcaaatctctggtcatcatcgaaatggagtctaaaggac
gagtacaagttactatcggagctcggtggcgccgccggcggcgcgaccgggtactacggc
gagttgttcgacgcgccttacgagcacgctgcgcacccgcactacacgccgcattctggt
aaggcaacaaacgactcaacgggttcgaacgggggcgcggggggcgagccgccctcggcc
gcggccagccccgacgcggcggcgctggtcgtgttacagccgcctgcgccgccttacccg
ccgtacgcgcattacgatggagcgacaaccctagcgagcgagtacgcgtacccggcaccg
tattcgcaatactcgccgtacggcgcgccgtattcgcacacgaccggcctgctcaccaag
tggtag
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integrated database retrieval system
