Choristoneura fumiferana (eastern spruce budworm): 141438688
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Entry
141438688 CDS
T11020
Symbol
Abcd1
Name
(RefSeq) ATP binding cassette subfamily D isoform X1
KO
K05676
ATP-binding cassette, subfamily D (ALD), member 2 [EC:
7.6.2.4
]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum02010
ABC transporters
cfum04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
141438688 (Abcd1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
141438688 (Abcd1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfum02000
]
141438688 (Abcd1)
Enzymes [BR:
cfum01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
141438688 (Abcd1)
Transporters [BR:
cfum02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD2 subgroup
141438688 (Abcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
SbmA_BacA
AAA_21
SMC_N
AAA_23
AAA_29
Rad17
AAA_5
AAA_15
Mg_chelatase
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
141438688
NCBI-ProteinID:
XP_073958687
LinkDB
All DBs
Position
19:complement(1340346..1427732)
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AA seq
759 aa
AA seq
DB search
MPAILTKLREQASRVQPSIAVGVGVGVALAACALYGTRERKQPPCPNNNNNYKVAKNGQL
HSVENGGSNGQTCGGHCGAEQCALCRGDVDTDNKQNIEDAEEPAPVEEHFPGLNLEFLRQ
MVSLAKIMIPGFRSHEVALLAGHTLCLFTRTLLSIYVAALEGSIMKHIVQKDLRRFAALL
LQWFGIAIPATFINSMIRYLESRLALAFRTRLVNHAYDMYFKNQTYYRVANLDARIENAD
HRLTEDVSVFTQSVAHLYGSLTKPCFDLLLIVLTLASYSSKMKGNIFIGPGFATVVICMT
GQVLRLLSPRFGALAGEEARMKANLRHVHASIIAHAEEVAFYGGHKVELNQLQTAYKALV
AQMTSVFNKKLWYVMLEQFCMKYVWSGTGMVMLALPILTATADGSASQGISERTEYMTTS
RHLLNSAADAIERLMSSYKEVVTLAGYAERVSDMLEVFSEVARGECVRAVHVTSGKDNPN
AFQVTFRDNRPVPQGKITYTSDLSIHLRSVPIVTPACDVVANGVTLDIAPGTHLLIVGPN
GCGKSSLFRIISGLWPVHGGSLAVPRPCACAACADERAPPTRCHSRPIMFYIPQRPYMSM
GSLIDQVTYPSRVSPNDQEAFDRATRILKVVRLDACAARHGGLRAVRDWRATLSGGEKQR
MAMARMFYHRPVYALLDECTSAVSMETEVVMYEEAVKEGITLLSITHRPSVWKYHSFVLE
FDGAGNWSYRPLEKDAPAITPSLPSSVPAPSLPSDSDSN
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgatactgaccaagctaagggagcaggcgtcgagggtacagccatcgatcgcg
gtgggagtgggcgtcggcgtggctttggccgcgtgcgcattgtacggcacacgcgagcgc
aagcagccgccttgcccgaacaacaacaataattataaggttgccaaaaacggtcagctg
cattctgtagagaatggaggttcaaatgggcagacgtgcggagggcactgcggggcggag
cagtgcgccctctgcagaggggatgtggacacggacaacaaacagaacattgaagacgca
gaagaaccagcgccagttgaggagcacttccctgggttgaacctggagttcctccggcag
atggtctccttggctaagatcatgatcccagggttccgaagccacgaggtagcattactg
gcggggcacacgctttgtctctttacgagaaccctgctgtccatatacgtggctgcactt
gagggatcgataatgaaacacatagtccagaaggacctccgccgtttcgcggctctcctc
ctccaatggttcggcatcgcgattcccgccactttcatcaactccatgattcgttacttg
gagagccggctagcattagccttccgcaccaggcttgtcaatcacgcgtacgacatgtat
ttcaagaaccagacgtactaccgagtcgctaacttggacgctaggatagaaaacgcagat
cacagattaacggaagacgtgtcagtgttcacacagtcagtggcgcacttgtacgggtcg
ctcacgaagccctgcttcgacctgctgctcatcgttctgaccctggccagctactccagc
aaaatgaagggaaatatcttcattgggcctggattcgcgacggtagtgatttgcatgacg
ggccaagtactgcgtctgctgtctccacgatttggcgctttagctggcgaggaagctcgt
atgaaggcgaatcttcgtcacgtgcacgcttctatcatcgcccacgctgaggaggttgcg
ttctacggaggacacaaggtggaactaaaccagcttcaaacggcgtacaaggcgctggtg
gcgcagatgacgtcggtgttcaacaagaagctgtggtacgtgatgctggagcagttctgc
atgaagtacgtgtggagcggcaccgggatggtcatgctggcgctgccgatcctcaccgcc
acggctgacggttccgccagccaaggcatcagcgagcgcacagagtacatgacgacgtcg
cgccatctcctcaactctgctgctgatgccatcgagaggttgatgtctagctacaaggaa
gtagtaactttagctggttacgcggagcgcgtgtctgacatgttggaggtgttcagtgag
gtggctcgcggagagtgcgtccgcgcggtgcacgtcacgtccggcaaggacaaccccaac
gcgttccaggtcaccttccgggacaaccgacccgtgccgcagggcaagataacatacacg
agcgacctgtccatccacctccggagcgtgccgatcgtgacgccggcctgcgacgtggtg
gccaacggcgtcacgctggacatcgcgcccggcacgcatctgcttattgtcggccctaac
ggctgcggcaagtctagtctgttccgcataatctctggcctgtggccggtgcacggcggg
tcgctggcggtgccgcggccgtgcgcgtgcgccgcgtgcgccgacgagcgcgcgccgccc
acgcgctgccactccagacccatcatgttctacataccgcaacgaccatacatgtcgatg
ggctccttaatcgaccaagtgacgtacccctcgcgggtgtccccgaacgaccaggaagcg
ttcgaccgggccactcgcatactgaaggtggtgcggctcgacgcgtgcgccgcgcggcac
ggcggactgcgcgccgtgcgggactggcgcgccacgctcagcggcggagagaaacaacgc
atggccatggcgaggatgttctaccacaggccggtgtacgctttgctggacgagtgcacg
agcgccgtctccatggaaaccgaggtggtgatgtacgaagaggctgtcaaagagggtatc
acgctgctttccatcacacacaggcctagcgtctggaaataccactcgttcgtcctagaa
ttcgacggtgccggcaactggtcctaccgtccactggagaaggacgctccggccatcacc
ccctccctcccctcctccgtacccgccccctccctccctagcgacagcgacagcaactga
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