Choristoneura fumiferana (eastern spruce budworm): 141439147
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Entry
141439147 CDS
T11020
Symbol
sip1
Name
(RefSeq) septin interacting protein 1
KO
K13103
tuftelin-interacting protein 11
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfum03041
]
141439147 (sip1)
Spliceosome [BR:
cfum03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
141439147 (sip1)
Other components
Complex C specific factors
141439147 (sip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
ABC_tran_CTD
Motif
Other DBs
NCBI-GeneID:
141439147
NCBI-ProteinID:
XP_073959404
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All DBs
Position
20:3779311..3803850
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AA seq
774 aa
AA seq
DB search
MSDDEVIRFEITDYDLDNEFNPNRRGRAKKEQQIYGVWAKDSDEDDNEDNVRQRSRKQKD
YAAPIGFVAGGVQQAGKKKEPKQELEPAESSSRVTIADSSDEEPTTVPDESETAGIRRQG
QGMRPANLGGNLGNWEKHTKGIGAKLLLQMGYQPGRGLGKDLQGISAPVEATIRKGRGAI
GAYGPEKAAIKAKKEEERRLKEKQDEEKGPEKSYHWKKSHKGRYFYRDSADVIQEGKPSM
HSITSSELSRVPVIDMTGKEKRVLSGYHALRAAAPRFEHEPRRRCTNFEAPQLLHNLEVM
VECCEQDIIQNARELQHAEDEIVVLERDIRECDDKLAEQEVVIDKVRDIKARVARLSQPE
ISLEAAYEVVADLKDVHPQEYEMFGIGAIAGNIVSPLFSAMMAAWEPLAAPSEPVPAFLK
WRPLLTEESYNSLLWQHVAPKLKAAAAVWNPRIPEPMLAVVSMWAAAWPGWLAAAPVATG
VGPRLLEAVRGWDPTGDTQPLHHWVLPWHSLAGEALSTSVYPLIRSRLAAALSAWHPADG
SARPLLGAWRGAWGAALPAMLHQHIVPKLEHCLQTAPVHLVGRENTAWGWCAEWEELLGA
PTLAAIAARALLPRWLAALAAWLNTQPQHRAVLNSYTQFKKMFSEDLLKEPGVRDAFRKA
LDMMNRSADIDSVEPPPPPRFTIPVEKKETSKIVDVLASVTQQKSFSELLESRCIERGIT
FVPVVGKTREGRPLYKIGADMQCYVIRNVIMYSQDSGRTFEPVGLDRLLGLAEE
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgacgaagtaatacgtttcgagataactgattacgatttagacaacgagttt
aacccaaacagacgagggagagccaagaaagagcaacaaatttatggtgtatgggctaag
gacagtgatgaagatgacaatgaagacaatgtgcggcagaggagtcgtaaacagaaggac
tatgcagcgcccattgggtttgtggcaggtggggttcagcaggcagggaagaagaaagaa
cccaaacaagaattggaaccagctgaatcatcttcccgggtgacaatagcagacagctct
gacgaggagccaacaacagtcccggatgagtcagagacagctggcatcagacggcaaggc
caaggcatgcggccggctaaccttgggggcaatttgggcaactgggagaaacataccaag
ggtataggagcgaagttacttttacagatgggttaccaaccaggtagagggttgggaaaa
gacctgcaaggtatatcagcaccggttgaggcgactattaggaaaggcaggggtgctata
ggcgcctatggtcccgaaaaggcagcgataaaagcgaaaaaggaggaggagcggcgtctg
aaagagaaacaagatgaagagaaagggccagaaaaatcttaccactggaagaaatcgcac
aagggtcgctacttctaccgcgactccgccgacgtcatacaagagggtaaaccttccatg
cactctatcaccagttcggagttatctcgcgtgccggtgatcgacatgactggtaaagag
aagcgcgtgctgagcggctaccacgcgctgcgggccgccgcgccgcgcttcgagcacgag
ccgcgacgccgctgcaccaactttgaggcgccgcagctgttgcacaacttggaggtcatg
gtcgaatgctgcgagcaggacataatccaaaacgctcgcgaactccaacacgcagaagac
gagattgttgtgctggagcgagacatccgcgagtgcgacgacaagctcgccgagcaagag
gtcgtgatagacaaagtcagggacatcaaagcgcgggtcgctcggctgagccagccggag
atctcgctggaagctgcctatgaggtcgtggcggatttgaaggacgtccaccctcaagaa
tacgagatgttcggcatcggcgcgatcgccggcaacatagtgagtcccctgttcagcgcc
atgatggcggcgtgggagcccctggcggccccctcggagcccgtgcccgcgtttctcaag
tggcggccgctgctcacagaggagtcttacaacagtctgctgtggcaacatgtcgcgccc
aaactgaaggctgctgccgccgtgtggaacccccgcatcccggagccgatgctagcggtg
gtgtctatgtgggcggcggcgtggccgggctggctggcggcggcgccggtcgccaccggg
gtgggcccgcggctgctggaggccgtgcgcggctgggaccccaccggcgacacgcagccg
ctgcaccactgggtgctgccctggcactcgctggcaggcgaagccctatcaacgtcagtg
tacccgctgatccgttcgcggctagcggcggcgctgtcggcgtggcacccggcggacggg
tcggcgcggccgctgctgggcgcgtggcgcggcgcgtggggcgccgccctgcccgccatg
ctgcatcagcacatcgtgcccaagctggagcactgtctgcagaccgcgcccgtgcacctc
gtgggaagggagaatacggcatggggctggtgcgcggagtgggaggagctcctgggcgcg
ccgacgctcgcggccatagcggcgcgcgctctgctgccgcgctggctggccgcgctggcc
gcctggctcaacacgcagccccagcatcgcgccgtgctcaacagctacacgcagttcaag
aaaatgttctccgaagacctcttaaaagagccgggcgtccgagacgccttcagaaaagcc
ctcgacatgatgaaccgaagtgcagacatcgactccgtcgaaccaccgcccccgccccgc
ttcaccatccccgtagaaaagaaggaaacctcaaagatcgtagacgttctcgcttcagtg
acacagcaaaaatcattctcagaacttctggagtcccggtgtattgaaagagggattact
ttcgttcctgtagtcggtaagacgagagaaggaaggccgttgtataaaattggggcggat
atgcagtgctatgttataaggaatgttattatgtattcccaggatagtggtaggacgttt
gagcctgttgggttagacaggcttttagggttggcagaggagtaa
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