Choristoneura fumiferana (eastern spruce budworm): 141439248
Help
Entry
141439248 CDS
T11020
Name
(RefSeq) LOW QUALITY PROTEIN: chromatin-remodeling ATPase INO80-like
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
141439248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfum03036
]
141439248
Chromosome and associated proteins [BR:
cfum03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
141439248
INO80 complex (yeast)
141439248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
HDA2-3
ResIII
Borrelia_orfA
Motif
Other DBs
NCBI-GeneID:
141439248
NCBI-ProteinID:
XP_073959582
LinkDB
All DBs
Position
20:complement(11287338..11312065)
Genome browser
AA seq
1466 aa
AA seq
DB search
MTENCVVGKPSLKRHEVAKPIHLQRLEAALDIRPFVNQVEQILNSDGGSDSDDDSDGKSM
GNEMSKGDRVVHGVVTTKQERQGDRLRLYNLTSVGEEREWLRNVLLSSESDTSSDEDTPE
GKQLRIKQLLKERHYHNKYAKEYYKDQGNSRYMYYGAGLLSTVDRYPERRVSRPVPPPTG
RGRRGRPSERGRGVQKSRRGRNREGRAEGVDMPDSMDWEEQLRNMKEEKDDEFAIVEKPG
VRGRKKLSTLKTPEALTARRRRHWQLLVKKELGKVQRARTATHREVMLQRKRLATLCCKH
WRHVAMQSQKNMKETVWRCKRLSREMQAYWRRYDRAERETRRRMEREAEEQRKMDVELME
AKRQRRKLNFLITQTELYAHFMQRKLNTGEDPEGTDRILRQLDEDRDPRLAAIDNYDSEA
MKSRASRNAREAFRTERARARQFGVGAATPATDASDDLSAPATPAAAPRGDHTQPDIFQG
TLKGYQLKGMNWLANLYDQGISGILADEMGLGKTVQCIAFLCHVAERLGVWGPFLVVSPA
STLHNWQQELQRFVPDFKVVPYWGSPSERKILRQFWERKDLHTRQAAFHVVVTSYQIVVS
DLKYLNRVSWQYMILDEAQAIKSSASMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLH
FIMPTLFDSHDEFNEWFSKDIESHAENKSTIDEKHLSRLHMILKPFMLRRIKKDVENELS
DKIEIMVHCPLTIRQKLLYIALKQKIKIEELLHFTVGTESGHNVDKNFTSNLMNLVMQFR
KVCNHPELFERRDVRSPFAMQVDDYHIPKLLADDGILIRSVPSKRHLLYNRLSVLAPEYV
HKGGGVFGFLRLIDVSPMELYRVMVCGWLCAIQHIEQCLEKFEKLRHRHFWWLRNTRAEV
KAEFAEVEEPPNADYYEDVGSKDRLLICPDGDVLRQRRSDSLLWRGLLFTDPLWTRVGPF
YTHTEHIIHYMAETIEHRNMRSRNLRNRDDQSAMLSEIKTEDGGLVSVPTAEVTEFPHEE
RAPVVYRDEPTALPAFLCTAQPKVCACPCAPFASSRGFAYHNTRHAHCESAAGAAVAARL
VAAARPPRGWAPLQVPDKNQLVSDAGKLTVLDSLLKRLKERGHRVLIYSQMTKMIDLLEE
YMWHRKHKYMRLDGSSKISARRDMVADFQARTDIFVFLLSTRAGGLGINLTAADTVIFYD
SDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERIMQRAREKSEIQRMVISGGNFK
PDTLKPKEVVSLLLDDEEIELKYRQKSEEKKQEERERKRKSAALPPQPAPVAMATAAPLA
KRSRESGSEPGSPLRVDDDEPRRSPPQVHPHAHIPFSPVGRAASWSATRCTRGARRGRPR
GVRHAARQPRPPPGTPGTSADAVAGAAMLESSAPLESSSASVRARRGPGRPRLRGAARAP
RGPPRRPRRAPEPLLVPLAPPPPPYL
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atgactgagaattgcgtcgtcggtaagccttcgctgaagcggcatgaagttgcgaagcct
atacatctccagaggctggaagccgccctggacatccgtccattcgtgaaccaggtggaa
cagatccttaactctgacggcggcagcgacagcgacgatgactccgacgggaagtctatg
ggaaatgaaatgtctaaaggcgacagggttgtgcatggagttgttaccaccaagcaagaa
cgccaaggtgatcgcctccgtctctacaacttaacctctgtgggagaagagcgagagtgg
ctccgtaatgtccttctgtcctcagaatctgataccagcagtgatgaggatactcctgaa
gggaaacagctcagaataaagcaattgctgaaagagaggcattaccataacaaatatgct
aaggaatattataaagatcaagggaactctcgctacatgtactatggcgcgggtctgctg
tccacggtagaccggtacccagagcggcgcgtaagcaggcccgtaccgccgccgactggg
cgcgggcggcgggggcggcccagcgagcgggggaggggggtgcagaaaagcaggcgaggc
cggaacagggagggcagggctgagggtgttgatatgcctgacagcatggattgggaagaa
caactgagaaacatgaaagaagaaaaagatgatgaatttgctattgtagaaaaacctgga
gtcaggggtcgcaagaaactgtccaccctcaaaaccccggaagccctgaccgcccgccgt
cggaggcactggcagctgctggtcaaaaaagagctcggaaaggtgcagcgggcgaggacg
gccacgcacagggaagtcatgctgcagaggaaacggctggccacgctgtgctgcaagcat
tggcggcatgttgctatgcagtcccaaaagaatatgaaagagacagtatggcggtgcaag
cggctaagcagagagatgcaagcgtactggaggaggtacgaccgcgccgagagggaaacg
agacggcgaatggagcgagaggccgaagaacagagaaagatggacgtggaactaatggag
gcgaaacggcaacgtcgcaagctgaacttcctcataacgcaaaccgagttgtatgctcac
ttcatgcagcggaaactgaatactggcgaagacccggaaggcacagaccggatactgcgg
cagttggatgaggacagggatcctaggctcgctgccattgataattacgacagcgaggcg
atgaaatcccgcgcgtcgcgtaacgctcgcgaagctttccgtacggagcgtgcgcgcgcg
cggcagttcggggttggggccgcgacccccgcgaccgacgcctccgacgacctcagcgcc
ccagcgacccccgcggcggcgccgcgcggcgaccacacgcaaccggacatcttccaggga
acgctcaaaggataccagttgaaggggatgaactggctagctaatctttatgatcagggc
atcagcggcatcctggctgatgagatgggtctcggcaagacagtgcagtgcatagcgttc
ctctgccacgtggcggaacggttgggcgtgtggggaccgtttttagtcgtgtctcctgcg
tcgacgctgcataattggcagcaggagttgcagcggttcgtgccggatttcaaagtggta
ccctactggggcagtcccagcgaacgcaaaatcctccgtcaattctgggagcgcaaagac
ctccacaccaggcaagcggcgttccacgtcgtcgtgacctcgtaccagatagtggtcagc
gacctcaagtacctcaaccgggtgtcgtggcagtacatgatactggatgaagctcaggcc
atcaagagctctgccagcatgcggtggaagctgctgcttggattcagctgtaggaaccgg
ctgttgctgtcaggcacgccgatacagaacagtatggcggagctctgggcgttgcttcac
ttcataatgccgacgctcttcgactcgcacgacgagttcaacgaatggttctccaaggat
atagagagccatgctgagaacaagagcactatcgatgagaagcacctgtcgcgactccac
atgatactgaagccattcatgctgcgacgaataaagaaggacgtggaaaacgagctgtca
gacaagatagagattatggtgcactgtccactcacgatacggcagaaactactgtacata
gcgttgaaacagaagatcaaaatcgaggagctgcttcacttcaccgtgggcaccgagtcg
gggcacaacgtcgacaaaaacttcacgtccaacctgatgaatctagtcatgcagttcagg
aaggtctgcaatcaccccgagctgttcgagcgccgggacgtccgctcccctttcgccatg
caagtcgatgactaccacatacccaagctactcgccgatgatggcattctaatacgctcc
gtgccctccaagcggcatttactttacaaccgactgtctgtattggcgccagagtatgtg
cacaagggcggcggcgtctttgggttcctgaggctcattgatgtgtcgcccatggagctt
tatagggtcatggtgtgcgggtggttgtgtgccatacaacatatagaacaatgcttagag
aagttcgaaaaactacgtcaccgacatttctggtggctacggaacactcgagccgaagtc
aaagcggaattcgcggaagtcgaagagccgccgaatgccgactactacgaggatgtcggc
agcaaagatagactgctgatatgccccgatggagatgtgctgcgacagaggaggagtgat
agtttgttgtggagaggtttgctgttcactgatccgctatggacgcgagttggtccattc
tacacgcacacggagcatattatacattatatggcggagacgatagaacatagaaacatg
aggagcaggaatctgaggaatcgagacgatcagtctgccatgctgagtgagataaagacg
gaagacggcggtttagtctccgtaccgacagccgaagtaacagagttcccgcacgaagag
cgagcgccggtcgtgtaccgagacgagccgacggcgctgccggcgttcttgtgcactgca
cagcccaaggtgtgcgcatgcccttgcgcgccgttcgcttcgtcgcgcggtttcgcgtac
cacaacacgcggcacgcgcactgcgagagcgcggccggggctgcggtcgccgcgcgcctc
gtggccgccgcgcgcccgccccgcggctgggcgccgctgcaagttccagataagaaccag
ctagtaagcgatgcgggaaagctgactgtgttggattcactgctgaaaagactgaaagag
agaggacacagggtgctcatttacagtcagatgacgaaaatgatcgacttactagaggaa
tacatgtggcacagaaaacacaaatacatgcggttagacgggtcgagcaaaatctccgcc
cgacgcgacatggttgctgatttccaagcgcggaccgatatcttcgtgtttctactgtcc
acgcgtgctggcgggctcgggatcaacctcactgccgctgatactgtgatattctacgac
tcagattggaacccgacggtggaccagcaggcgatggaccgcgcacacagactcggccag
accaagcaagtcaccgtgtaccgtctcatctgcaaagggaccatcgaggagaggataatg
caacgcgctagggaaaagagcgagattcaaaggatggtgataagcggcggtaatttcaaa
ccagacacgctgaagccaaaggaagtagtctcgttgttgttggacgatgaagaaattgaa
ctcaaatatcggcaaaagtctgaagaaaagaaacaagaagaaagagagcggaaacggaag
tcagccgctctacctccccaaccagcgccggtggcgatggcgaccgcggcgccgctggcg
aagcgctcgcgcgagtcaggctccgagcccggcagcccgctgcgcgtcgacgacgacgag
ccgcgccgctcgccgccgcaggtgcacccgcacgcgcacataccgttctcgccagtgggc
cgcgcggcgtcctggtcggcgacgcgttgcacgcgcggcgcgcggcgcggccggccgcgc
ggggtgcgccacgccgcgcgacagccgcgaccgccgcccgggacgcccgggacctctgct
gacgccgtcgctggtgctgcgatgctggagtcgtccgcgccgctggagtcgagctcggcg
agcgtgcgcgcgcgtcgcgggccggggcggccgcggctgcgcggtgcggcgcgcgcgccc
cgcggcccgccgcgccgcccgcgccgcgcgcccgagccgctgctggtgccgctggcgccg
ccgccgccgccctacctctag
DBGET
integrated database retrieval system
