Choristoneura fumiferana (eastern spruce budworm): 141439273
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Entry
141439273 CDS
T11020
Name
(RefSeq) uncharacterized protein
KO
K25178
coiled-coil domain-containing protein 174
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfum03019
]
141439273
03041 Spliceosome [BR:
cfum03041
]
141439273
Messenger RNA biogenesis [BR:
cfum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
141439273
Spliceosome [BR:
cfum03041
]
Complex C
Other components
EJC/TREX
141439273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
141439273
NCBI-ProteinID:
XP_073959622
LinkDB
All DBs
Position
20:complement(9124917..9131111)
Genome browser
AA seq
565 aa
AA seq
DB search
MNDQRSKKILFNKSSLLSLKAELLKKQEEVQDKKHLPQHRVDSYKPPVAKAKNVKDTEKP
GKRSFKDNLKAVDTDELEACRKSKLALEKKAELYAHLADGAGNSELSGRFLVDFNTKKQQ
EPEPECKSSQDTDVTYQSYEEVESEWTEFTDCLGRTRKCLKSDLDLYIKRDQELMQTMIK
DQVKPIEEMPENEVPQVEKPLLVQKTNDYLQSLREKWEEKERELLAKDKDIHYQDLLYDE
ARIHGVSYFSFSTDEAERQKQMEALKKQRQETLAAQAEAEERRRKRDELLAARVAAARAR
QRARAGLPPEDPTKENEKDFTTCLLEFLTQQKNEADNKAKEEEKKIKEEQEKERQKLRDA
YVRDWDIGKEGVEGKVKKFREMTQEEYVEQQRAKRIEEFAPIQGSCRDGSNYTFDGRGKV
VAPDNYPPLSKSWTDVRPKVKTPPPPIISYTEPEEKGLYFSSKKSMPKPSVQYKNFVKAQ
PTPIENEISDDESEAQRSEERNPEANHAEIAPPPTYDYYGPVPKKYKPQKPFVSDIREAY
AQGARSLEPKSSSERLPQHYDFTFD
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatcaacgatcgaaaaagattttgttcaacaaatcttccttgctgagtttaaaa
gcagaacttttaaagaagcaagaagaagtacaagataagaaacatttgcctcaacataga
gtagacagttataagcctcctgttgctaaagctaaaaatgttaaagatactgagaaacca
gggaaaagaagtttcaaggacaatcttaaagcagttgacactgatgagctggaggcctgt
aggaagtcaaaattggcattagaaaaaaaagcagagttgtatgcacatttggcagatggt
gctggcaattcggaactcagtggtagatttctagtggactttaatactaaaaagcagcag
gaaccggaacctgagtgtaaatccagtcaggacactgatgtaacatatcaaagctatgag
gaagttgaaagtgaatggaccgaattcacggattgtcttggcaggacacgcaaatgtctt
aaatcagatttagacctttacatcaaacgagaccaggaactgatgcagactatgattaag
gaccaagtaaaaccgattgaagaaatgccagaaaatgaagtgcctcaagttgaaaaacca
ctgttagtacaaaaaacaaatgactacttgcaatcattgcgcgaaaaatgggaagagaaa
gaacgagaactccttgctaaagataaagatatccactatcaggatctactttatgacgag
gcaagaatccacggcgtgagctacttttcgtttagcaccgacgaagcggagcgccagaag
cagatggaggcgctgaaaaagcagcggcaggagaccctcgcggcgcaggcggaggccgaa
gagcggcgccggaagcgcgatgagctgttagcggcgcgcgtcgcggccgcgcgggcgcgc
cagagggcgcgcgcgggactgccgcccgaagaccccaccaaagagaatgaaaaagacttc
acaacctgtctacttgagtttttgacgcaacaaaagaacgaagctgacaataaagcgaaa
gaagaagagaagaagataaaggaggaacaagaaaaagaaagacagaagttacgagatgct
tacgtacgagactgggacatcgggaaagaaggcgtcgaaggtaaagtaaagaaattcaga
gaaatgactcaagaagaatatgttgagcagcaacgagcaaagagaatagaagaatttgct
cccatacagggatcttgcagagatggctccaactatacatttgacggaagaggtaaagta
gtggctcctgataattatccgcctctgtctaaatcgtggacagatgtaaggccgaaggtt
aaaactcctccacctcctattataagctatacagaacctgaggaaaaaggtctttatttc
tctagtaagaaatctatgcctaaaccgagtgtgcaatataagaattttgtgaaagctcag
cctactcctatagagaatgagataagtgatgacgaatctgaggcacagagaagtgaggaa
agaaatcctgaagcgaatcatgcagaaatagctccgcctcctacgtatgattactatgga
cctgtgccgaaaaagtataaacctcagaaaccctttgtatctgacattagggaagcgtat
gcgcaaggtgcaaggagccttgaacctaaatctagtagtgaacggctaccacagcactat
gatttcacattcgattga
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