KEGG   Choristoneura fumiferana (eastern spruce budworm): 141439304
Entry
141439304         CDS       T11020                                 
Symbol
Polr2F
Name
(RefSeq) RNA polymerase II subunit RpII18
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
cfum  Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03020  RNA polymerase
cfum03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cfum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    141439304 (Polr2F)
  09124 Replication and repair
   03420 Nucleotide excision repair
    141439304 (Polr2F)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cfum03021]
    141439304 (Polr2F)
   03400 DNA repair and recombination proteins [BR:cfum03400]
    141439304 (Polr2F)
Transcription machinery [BR:cfum03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     141439304 (Polr2F)
  RNA polymerase III system
   RNA polymerase III
     141439304 (Polr2F)
  RNA polymerase I system
   RNA polymerase I
     141439304 (Polr2F)
DNA repair and recombination proteins [BR:cfum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      141439304 (Polr2F)
SSDB
Motif
Pfam: RNA_pol_Rpb6 CENP-B_dimeris
Other DBs
NCBI-GeneID: 141439304
NCBI-ProteinID: XP_073959669
LinkDB
Position
20:complement(8730353..8732022)
AA seq 132 aa
MADEEYEADDAGVDYDEIAEEDDNIEETEEQEEDGYNIQCVAPGQAGGGVEKSKRITTRY
MTKYERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKQRKIPIIIRRYLPDHSYE
DWSIDELIIIDH
NT seq 399 nt   +upstreamnt  +downstreamnt
atggctgacgaagaatatgaggctgacgatgcgggcgtagactatgatgaaatcgctgag
gaggacgataacattgaggagactgaagagcaggaggaagatggttacaacatccagtgc
gtcgcgcccggccaggccggtggcggcgtcgaaaagtccaagcggatcaccactcgatac
atgaccaaatacgaacgtgcccgagtcttaggtacaagggcacttcaaatagcgatgtgt
gctcctgtcatggtggagcttgagggtgaaacagatcctctgcaaattgctatgaaggag
cttaagcagcgcaaaattcctatcattattcgaagatacctcccagaccattcctatgaa
gactggagcatagatgaacttattattattgaccactaa

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